Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 AL441883.1-201ENST00000566170 1045 ntBASIC18.64■□□□□ 0.57
HTR1BP28222 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.64■□□□□ 0.57
HTR1BP28222 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.64■□□□□ 0.57
HTR1BP28222 AC008622.2-201ENST00000617006 1229 ntBASIC18.64■□□□□ 0.57
HTR1BP28222 CR769767.2-201ENST00000622735 460 ntBASIC18.64■□□□□ 0.57
HTR1BP28222 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTR1BP28222 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTR1BP28222 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTR1BP28222 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTR1BP28222 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HTR1BP28222 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.64■□□□□ 0.57
HTR1BP28222 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTR1BP28222 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.64■□□□□ 0.57
HTR1BP28222 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.63■□□□□ 0.57
HTR1BP28222 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
HTR1BP28222 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTR1BP28222 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTR1BP28222 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTR1BP28222 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTR1BP28222 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.63■□□□□ 0.57
HTR1BP28222 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTR1BP28222 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.63■□□□□ 0.57
HTR1BP28222 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.63■□□□□ 0.57
HTR1BP28222 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.63■□□□□ 0.57
HTR1BP28222 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.63■□□□□ 0.57
HTR1BP28222 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.63■□□□□ 0.57
HTR1BP28222 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HTR1BP28222 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.63■□□□□ 0.57
HTR1BP28222 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTR1BP28222 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HTR1BP28222 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HTR1BP28222 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTR1BP28222 GPAT2P1-201ENST00000444924 1672 ntBASIC18.63■□□□□ 0.57
HTR1BP28222 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.63■□□□□ 0.57
HTR1BP28222 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTR1BP28222 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTR1BP28222 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1BP28222 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1BP28222 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.62■□□□□ 0.57
HTR1BP28222 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.62■□□□□ 0.57
HTR1BP28222 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1BP28222 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1BP28222 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1BP28222 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1BP28222 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HTR1BP28222 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.62■□□□□ 0.57
HTR1BP28222 AL359075.1-203ENST00000462729 1002 ntBASIC18.62■□□□□ 0.57
HTR1BP28222 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HTR1BP28222 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.62■□□□□ 0.57
HTR1BP28222 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1BP28222 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.62■□□□□ 0.57
HTR1BP28222 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.62■□□□□ 0.57
HTR1BP28222 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1BP28222 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1BP28222 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.62■□□□□ 0.57
HTR1BP28222 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1BP28222 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1BP28222 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1BP28222 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1BP28222 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.62■□□□□ 0.57
HTR1BP28222 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HTR1BP28222 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1BP28222 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
HTR1BP28222 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1BP28222 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1BP28222 NEFHP1-201ENST00000412845 2629 ntBASIC18.62■□□□□ 0.57
HTR1BP28222 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1BP28222 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1BP28222 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1BP28222 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
HTR1BP28222 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
HTR1BP28222 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1BP28222 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1BP28222 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1BP28222 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.61■□□□□ 0.57
HTR1BP28222 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1BP28222 TEX21P-204ENST00000641479 1693 ntBASIC18.61■□□□□ 0.57
HTR1BP28222 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1BP28222 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
HTR1BP28222 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1BP28222 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1BP28222 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.61■□□□□ 0.57
HTR1BP28222 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.61■□□□□ 0.57
HTR1BP28222 AL023284.2-201ENST00000405850 579 ntBASIC18.61■□□□□ 0.57
HTR1BP28222 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1BP28222 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.61■□□□□ 0.57
HTR1BP28222 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.61■□□□□ 0.57
HTR1BP28222 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.61■□□□□ 0.57
HTR1BP28222 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.61■□□□□ 0.57
HTR1BP28222 AC091076.1-201ENST00000610741 619 ntBASIC18.61■□□□□ 0.57
HTR1BP28222 MYC-208ENST00000641036 567 ntBASIC18.61■□□□□ 0.57
HTR1BP28222 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HTR1BP28222 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1BP28222 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1BP28222 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1BP28222 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1BP28222 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.6■□□□□ 0.57
HTR1BP28222 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1BP28222 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HTR1BP28222 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms