Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD40P25942 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD40P25942 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.14■□□□□ 0.17
CD40P25942 ZNF444P1-201ENST00000559497 298 ntBASIC16.14■□□□□ 0.17
CD40P25942 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CD40P25942 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CD40P25942 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CD40P25942 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CD40P25942 AC068587.9-201ENST00000641814 219 ntBASIC16.14■□□□□ 0.17
CD40P25942 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.14■□□□□ 0.17
CD40P25942 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD40P25942 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CD40P25942 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CD40P25942 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD40P25942 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD40P25942 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD40P25942 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.14■□□□□ 0.17
CD40P25942 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CD40P25942 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD40P25942 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CD40P25942 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.13■□□□□ 0.17
CD40P25942 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.13■□□□□ 0.17
CD40P25942 HOXB1-202ENST00000577092 1414 ntBASIC16.13■□□□□ 0.17
CD40P25942 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CD40P25942 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD40P25942 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CD40P25942 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CD40P25942 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD40P25942 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD40P25942 VENTXP5-201ENST00000523979 775 ntBASIC16.13■□□□□ 0.17
CD40P25942 AL136038.3-201ENST00000561909 1096 ntBASIC16.13■□□□□ 0.17
CD40P25942 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CD40P25942 AC083849.1-201ENST00000615227 514 ntBASIC16.13■□□□□ 0.17
CD40P25942 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD40P25942 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CD40P25942 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CD40P25942 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CD40P25942 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CD40P25942 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD40P25942 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD40P25942 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.13■□□□□ 0.17
CD40P25942 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD40P25942 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CD40P25942 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.13■□□□□ 0.17
CD40P25942 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD40P25942 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CD40P25942 IER3-202ENST00000376377 1350 ntBASIC16.13■□□□□ 0.17
CD40P25942 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD40P25942 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CD40P25942 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CD40P25942 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD40P25942 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD40P25942 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CD40P25942 AC034236.2-201ENST00000606662 1610 ntBASIC16.12■□□□□ 0.17
CD40P25942 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CD40P25942 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD40P25942 AL161938.1-201ENST00000569833 2180 ntBASIC16.12■□□□□ 0.17
CD40P25942 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD40P25942 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.12■□□□□ 0.17
CD40P25942 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD40P25942 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.12■□□□□ 0.17
CD40P25942 UPK3BP1-201ENST00000428678 509 ntBASIC16.12■□□□□ 0.17
CD40P25942 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.12■□□□□ 0.17
CD40P25942 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD40P25942 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.12■□□□□ 0.17
CD40P25942 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD40P25942 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CD40P25942 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.12■□□□□ 0.17
CD40P25942 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CD40P25942 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD40P25942 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.12■□□□□ 0.17
CD40P25942 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
CD40P25942 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CD40P25942 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CD40P25942 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
CD40P25942 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD40P25942 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD40P25942 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CD40P25942 AC005332.1-201ENST00000577698 1310 ntBASIC16.12■□□□□ 0.17
CD40P25942 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD40P25942 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD40P25942 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.12■□□□□ 0.17
CD40P25942 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD40P25942 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD40P25942 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD40P25942 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CD40P25942 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CD40P25942 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD40P25942 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CD40P25942 SLC25A24-204ENST00000569674 2357 ntBASIC16.11■□□□□ 0.17
CD40P25942 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD40P25942 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD40P25942 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD40P25942 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.11■□□□□ 0.17
CD40P25942 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD40P25942 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CD40P25942 HBZP1-201ENST00000354915 429 ntBASIC16.11■□□□□ 0.17
CD40P25942 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CD40P25942 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CD40P25942 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms