Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.55■□□□□ 0.24
MSR1P21757 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MSR1P21757 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
MSR1P21757 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
MSR1P21757 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
MSR1P21757 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MSR1P21757 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
MSR1P21757 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.55■□□□□ 0.24
MSR1P21757 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.55■□□□□ 0.24
MSR1P21757 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
MSR1P21757 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.54■□□□□ 0.24
MSR1P21757 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSR1P21757 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSR1P21757 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
MSR1P21757 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSR1P21757 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.54■□□□□ 0.24
MSR1P21757 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
MSR1P21757 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSR1P21757 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSR1P21757 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSR1P21757 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSR1P21757 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSR1P21757 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.54■□□□□ 0.24
MSR1P21757 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSR1P21757 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSR1P21757 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSR1P21757 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSR1P21757 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.54■□□□□ 0.24
MSR1P21757 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSR1P21757 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.54■□□□□ 0.24
MSR1P21757 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
MSR1P21757 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.54■□□□□ 0.24
MSR1P21757 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
MSR1P21757 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.54■□□□□ 0.24
MSR1P21757 CRYGFP-201ENST00000418459 633 ntBASIC16.54■□□□□ 0.24
MSR1P21757 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.54■□□□□ 0.24
MSR1P21757 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.54■□□□□ 0.24
MSR1P21757 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MSR1P21757 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSR1P21757 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSR1P21757 WIZP1-201ENST00000531444 2299 ntBASIC16.54■□□□□ 0.24
MSR1P21757 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSR1P21757 RCC2P3-201ENST00000418112 1537 ntBASIC16.54■□□□□ 0.24
MSR1P21757 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MSR1P21757 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.54■□□□□ 0.24
MSR1P21757 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
MSR1P21757 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSR1P21757 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSR1P21757 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.54■□□□□ 0.24
MSR1P21757 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
MSR1P21757 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
MSR1P21757 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.54■□□□□ 0.24
MSR1P21757 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MSR1P21757 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MSR1P21757 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.53■□□□□ 0.24
MSR1P21757 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
MSR1P21757 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MSR1P21757 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MSR1P21757 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.53■□□□□ 0.24
MSR1P21757 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MSR1P21757 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.53■□□□□ 0.24
MSR1P21757 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MSR1P21757 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MSR1P21757 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
MSR1P21757 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MSR1P21757 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
MSR1P21757 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.53■□□□□ 0.24
MSR1P21757 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MSR1P21757 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MSR1P21757 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MSR1P21757 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MSR1P21757 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
MSR1P21757 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.53■□□□□ 0.24
MSR1P21757 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MSR1P21757 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.53■□□□□ 0.24
MSR1P21757 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.53■□□□□ 0.24
MSR1P21757 MTMR9LP-203ENST00000426597 1545 ntBASIC16.53■□□□□ 0.24
MSR1P21757 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MSR1P21757 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MSR1P21757 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.53■□□□□ 0.24
MSR1P21757 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MSR1P21757 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MSR1P21757 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MSR1P21757 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MSR1P21757 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.53■□□□□ 0.24
MSR1P21757 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
MSR1P21757 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
MSR1P21757 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
MSR1P21757 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MSR1P21757 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.52■□□□□ 0.24
MSR1P21757 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.52■□□□□ 0.24
MSR1P21757 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MSR1P21757 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MSR1P21757 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
MSR1P21757 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MSR1P21757 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
MSR1P21757 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
MSR1P21757 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MSR1P21757 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MSR1P21757 UNC93B2-201ENST00000285383 730 ntBASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms