Protein–RNA interactions for Protein: P0CJ79

ZNF888, Zinc finger protein 888, humanhuman

Predicted RBP Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF888P0CJ79 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF888P0CJ79 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF888P0CJ79 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.76■□□□□ 0.43
ZNF888P0CJ79 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
ZNF888P0CJ79 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF888P0CJ79 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.76■□□□□ 0.43
ZNF888P0CJ79 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
ZNF888P0CJ79 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF888P0CJ79 TERF1P1-201ENST00000311003 1181 ntBASIC17.76■□□□□ 0.43
ZNF888P0CJ79 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.76■□□□□ 0.43
ZNF888P0CJ79 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
ZNF888P0CJ79 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.76■□□□□ 0.43
ZNF888P0CJ79 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
ZNF888P0CJ79 AC005521.1-201ENST00000393351 872 ntBASIC17.76■□□□□ 0.43
ZNF888P0CJ79 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF888P0CJ79 AL137013.1-201ENST00000432946 1228 ntBASIC17.76■□□□□ 0.43
ZNF888P0CJ79 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.76■□□□□ 0.43
ZNF888P0CJ79 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF888P0CJ79 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.76■□□□□ 0.43
ZNF888P0CJ79 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.76■□□□□ 0.43
ZNF888P0CJ79 AL512604.3-201ENST00000569583 964 ntBASIC17.76■□□□□ 0.43
ZNF888P0CJ79 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF888P0CJ79 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.76■□□□□ 0.43
ZNF888P0CJ79 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF888P0CJ79 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF888P0CJ79 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF888P0CJ79 AC004408.2-201ENST00000623613 2777 ntBASIC17.76■□□□□ 0.43
ZNF888P0CJ79 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF888P0CJ79 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF888P0CJ79 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF888P0CJ79 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF888P0CJ79 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.75■□□□□ 0.43
ZNF888P0CJ79 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ZNF888P0CJ79 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.75■□□□□ 0.43
ZNF888P0CJ79 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF888P0CJ79 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.75■□□□□ 0.43
ZNF888P0CJ79 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
ZNF888P0CJ79 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF888P0CJ79 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ZNF888P0CJ79 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF888P0CJ79 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF888P0CJ79 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF888P0CJ79 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF888P0CJ79 MIR564-202ENST00000385049 94 ntBASIC17.75■□□□□ 0.43
ZNF888P0CJ79 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF888P0CJ79 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.75■□□□□ 0.43
ZNF888P0CJ79 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.75■□□□□ 0.43
ZNF888P0CJ79 AC009947.2-201ENST00000444014 672 ntBASIC17.75■□□□□ 0.43
ZNF888P0CJ79 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.75■□□□□ 0.43
ZNF888P0CJ79 WWOX-216ENST00000569818 525 ntBASIC17.75■□□□□ 0.43
ZNF888P0CJ79 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.75■□□□□ 0.43
ZNF888P0CJ79 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ZNF888P0CJ79 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
ZNF888P0CJ79 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ZNF888P0CJ79 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
ZNF888P0CJ79 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF888P0CJ79 AL031598.1-201ENST00000561511 1773 ntBASIC17.75■□□□□ 0.43
ZNF888P0CJ79 Z98044.1-201ENST00000632503 1764 ntBASIC17.75■□□□□ 0.43
ZNF888P0CJ79 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
ZNF888P0CJ79 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ZNF888P0CJ79 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
ZNF888P0CJ79 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF888P0CJ79 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF888P0CJ79 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF888P0CJ79 ANO7L1-203ENST00000602586 1720 ntBASIC17.75■□□□□ 0.43
ZNF888P0CJ79 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF888P0CJ79 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF888P0CJ79 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF888P0CJ79 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF888P0CJ79 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
ZNF888P0CJ79 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.74■□□□□ 0.43
ZNF888P0CJ79 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
ZNF888P0CJ79 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF888P0CJ79 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF888P0CJ79 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF888P0CJ79 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF888P0CJ79 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.74■□□□□ 0.43
ZNF888P0CJ79 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
ZNF888P0CJ79 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.74■□□□□ 0.43
ZNF888P0CJ79 KRT18P57-201ENST00000443599 1254 ntBASIC17.74■□□□□ 0.43
ZNF888P0CJ79 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF888P0CJ79 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF888P0CJ79 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.74■□□□□ 0.43
ZNF888P0CJ79 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.74■□□□□ 0.43
ZNF888P0CJ79 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.74■□□□□ 0.43
ZNF888P0CJ79 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF888P0CJ79 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
ZNF888P0CJ79 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ZNF888P0CJ79 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF888P0CJ79 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF888P0CJ79 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF888P0CJ79 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.73■□□□□ 0.43
ZNF888P0CJ79 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF888P0CJ79 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF888P0CJ79 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF888P0CJ79 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF888P0CJ79 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF888P0CJ79 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.73■□□□□ 0.43
ZNF888P0CJ79 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF888P0CJ79 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms