Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.86■□□□□ 0.61
RETP07949 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.86■□□□□ 0.61
RETP07949 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.86■□□□□ 0.61
RETP07949 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RETP07949 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
RETP07949 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.86■□□□□ 0.61
RETP07949 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
RETP07949 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RETP07949 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RETP07949 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RETP07949 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RETP07949 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RETP07949 TREX1-205ENST00000625293 1783 ntBASIC18.86■□□□□ 0.61
RETP07949 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.86■□□□□ 0.61
RETP07949 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RETP07949 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RETP07949 AL162741.1-201ENST00000565563 1558 ntBASIC18.85■□□□□ 0.61
RETP07949 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RETP07949 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RETP07949 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.85■□□□□ 0.61
RETP07949 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RETP07949 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RETP07949 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.85■□□□□ 0.61
RETP07949 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RETP07949 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RETP07949 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RETP07949 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RETP07949 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RETP07949 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.85■□□□□ 0.61
RETP07949 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RETP07949 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RETP07949 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
RETP07949 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RETP07949 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.85■□□□□ 0.61
RETP07949 DRAXINP1-201ENST00000437611 948 ntBASIC18.85■□□□□ 0.61
RETP07949 KRT18P31-201ENST00000506277 1292 ntBASIC18.85■□□□□ 0.61
RETP07949 AP000867.3-201ENST00000524675 377 ntBASIC18.85■□□□□ 0.61
RETP07949 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RETP07949 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.85■□□□□ 0.61
RETP07949 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.85■□□□□ 0.61
RETP07949 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RETP07949 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RETP07949 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.84■□□□□ 0.61
RETP07949 TNXA-203ENST00000507684 2038 ntBASIC18.84■□□□□ 0.61
RETP07949 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RETP07949 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RETP07949 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RETP07949 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RETP07949 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
RETP07949 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RETP07949 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RETP07949 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.84■□□□□ 0.61
RETP07949 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.84■□□□□ 0.61
RETP07949 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
RETP07949 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
RETP07949 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.84■□□□□ 0.61
RETP07949 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.84■□□□□ 0.61
RETP07949 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.84■□□□□ 0.61
RETP07949 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.84■□□□□ 0.61
RETP07949 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.84■□□□□ 0.61
RETP07949 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RETP07949 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.84■□□□□ 0.61
RETP07949 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RETP07949 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RETP07949 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RETP07949 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RETP07949 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RETP07949 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RETP07949 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RETP07949 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RETP07949 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RETP07949 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
RETP07949 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.83■□□□□ 0.61
RETP07949 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.83■□□□□ 0.61
RETP07949 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RETP07949 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.83■□□□□ 0.61
RETP07949 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.83■□□□□ 0.61
RETP07949 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
RETP07949 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RETP07949 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.83■□□□□ 0.6
RETP07949 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.83■□□□□ 0.6
RETP07949 FOSL1P1-201ENST00000511041 816 ntBASIC18.83■□□□□ 0.6
RETP07949 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.83■□□□□ 0.6
RETP07949 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.83■□□□□ 0.6
RETP07949 AC012615.1-201ENST00000565797 1299 ntBASIC18.83■□□□□ 0.6
RETP07949 BX640515.1-201ENST00000617215 977 ntBASIC18.83■□□□□ 0.6
RETP07949 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RETP07949 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.83■□□□□ 0.6
RETP07949 AC093484.2-201ENST00000580996 2166 ntBASIC18.83■□□□□ 0.6
RETP07949 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RETP07949 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RETP07949 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RETP07949 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.83■□□□□ 0.6
RETP07949 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.83■□□□□ 0.6
RETP07949 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RETP07949 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RETP07949 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.82■□□□□ 0.6
RETP07949 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RETP07949 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RETP07949 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms