Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CHGBP05060 USP49-202ENST00000373010 2446 ntTSL 5 BASIC22.48■■□□□ 1.19
CHGBP05060 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
CHGBP05060 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
CHGBP05060 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CHGBP05060 AC063952.2-201ENST00000498792 1227 ntBASIC22.48■■□□□ 1.19
CHGBP05060 KRT18P35-201ENST00000510488 1269 ntBASIC22.48■■□□□ 1.19
CHGBP05060 AL049597.2-201ENST00000565575 961 ntBASIC22.48■■□□□ 1.19
CHGBP05060 NTF6B-201ENST00000591913 560 ntBASIC22.48■■□□□ 1.19
CHGBP05060 AL445228.2-201ENST00000605589 952 ntBASIC22.48■■□□□ 1.19
CHGBP05060 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
CHGBP05060 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CHGBP05060 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CHGBP05060 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CHGBP05060 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC22.48■■□□□ 1.19
CHGBP05060 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.48■■□□□ 1.19
CHGBP05060 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC22.48■■□□□ 1.19
CHGBP05060 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CHGBP05060 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CHGBP05060 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CHGBP05060 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC22.48■■□□□ 1.19
CHGBP05060 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CHGBP05060 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
CHGBP05060 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
CHGBP05060 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC22.48■■□□□ 1.19
CHGBP05060 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CHGBP05060 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
CHGBP05060 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC22.47■■□□□ 1.19
CHGBP05060 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
CHGBP05060 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC22.47■■□□□ 1.19
CHGBP05060 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC22.47■■□□□ 1.19
CHGBP05060 TSPY5P-201ENST00000426936 936 ntBASIC22.47■■□□□ 1.19
CHGBP05060 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC22.47■■□□□ 1.19
CHGBP05060 ANO7L1-203ENST00000602586 1720 ntBASIC22.47■■□□□ 1.19
CHGBP05060 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CHGBP05060 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CHGBP05060 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CHGBP05060 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
CHGBP05060 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CHGBP05060 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CHGBP05060 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CHGBP05060 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC22.47■■□□□ 1.19
CHGBP05060 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
CHGBP05060 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CHGBP05060 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CHGBP05060 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CHGBP05060 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC22.47■■□□□ 1.19
CHGBP05060 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CHGBP05060 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC22.47■■□□□ 1.19
CHGBP05060 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
CHGBP05060 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CHGBP05060 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
CHGBP05060 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CHGBP05060 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC22.46■■□□□ 1.19
CHGBP05060 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CHGBP05060 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CHGBP05060 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CHGBP05060 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CHGBP05060 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CHGBP05060 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC22.46■■□□□ 1.19
CHGBP05060 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC22.46■■□□□ 1.19
CHGBP05060 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC22.46■■□□□ 1.19
CHGBP05060 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC22.46■■□□□ 1.19
CHGBP05060 AL359075.1-203ENST00000462729 1002 ntBASIC22.46■■□□□ 1.19
CHGBP05060 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC22.46■■□□□ 1.19
CHGBP05060 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC22.46■■□□□ 1.19
CHGBP05060 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CHGBP05060 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC22.46■■□□□ 1.19
CHGBP05060 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC22.46■■□□□ 1.19
CHGBP05060 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC22.46■■□□□ 1.19
CHGBP05060 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC22.46■■□□□ 1.19
CHGBP05060 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC22.46■■□□□ 1.19
CHGBP05060 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
CHGBP05060 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC22.46■■□□□ 1.19
CHGBP05060 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CHGBP05060 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CHGBP05060 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
CHGBP05060 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CHGBP05060 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CHGBP05060 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CHGBP05060 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
CHGBP05060 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC22.45■■□□□ 1.19
CHGBP05060 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC22.45■■□□□ 1.19
CHGBP05060 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
CHGBP05060 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CHGBP05060 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CHGBP05060 ANKRD20A18P-201ENST00000359341 492 ntBASIC22.45■■□□□ 1.18
CHGBP05060 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CHGBP05060 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CHGBP05060 RNF152P1-201ENST00000397754 604 ntBASIC22.45■■□□□ 1.18
CHGBP05060 SNX5-210ENST00000481323 562 ntTSL 3 BASIC22.45■■□□□ 1.18
CHGBP05060 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC22.45■■□□□ 1.18
CHGBP05060 AC022616.7-201ENST00000525383 220 ntBASIC22.45■■□□□ 1.18
CHGBP05060 CD81-212ENST00000526072 1172 ntTSL 5 BASIC22.45■■□□□ 1.18
CHGBP05060 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC22.45■■□□□ 1.18
CHGBP05060 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CHGBP05060 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CHGBP05060 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CHGBP05060 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CHGBP05060 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms