Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPB1P04440 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPB1P04440 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPB1P04440 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPB1P04440 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPB1P04440 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPB1P04440 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DPB1P04440 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DPB1P04440 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPB1P04440 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPB1P04440 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPB1P04440 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.84■□□□□ 0.29
HLA-DPB1P04440 POM121L13P-201ENST00000422362 380 ntBASIC16.84■□□□□ 0.29
HLA-DPB1P04440 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.84■□□□□ 0.29
HLA-DPB1P04440 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DPB1P04440 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.84■□□□□ 0.29
HLA-DPB1P04440 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
HLA-DPB1P04440 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
HLA-DPB1P04440 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.84■□□□□ 0.29
HLA-DPB1P04440 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPB1P04440 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPB1P04440 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPB1P04440 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPB1P04440 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPB1P04440 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPB1P04440 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
HLA-DPB1P04440 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPB1P04440 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPB1P04440 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
HLA-DPB1P04440 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
HLA-DPB1P04440 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
HLA-DPB1P04440 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DPB1P04440 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DPB1P04440 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DPB1P04440 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DPB1P04440 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DPB1P04440 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DPB1P04440 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DPB1P04440 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
HLA-DPB1P04440 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.83■□□□□ 0.28
HLA-DPB1P04440 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DPB1P04440 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DPB1P04440 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DPB1P04440 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DPB1P04440 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DPB1P04440 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DPB1P04440 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DPB1P04440 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DPB1P04440 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.83■□□□□ 0.28
HLA-DPB1P04440 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DPB1P04440 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DPB1P04440 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.83■□□□□ 0.28
HLA-DPB1P04440 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DPB1P04440 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 KRT17P3-201ENST00000420566 1262 ntBASIC16.82■□□□□ 0.28
HLA-DPB1P04440 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 AC233263.1-201ENST00000578059 224 ntBASIC16.82■□□□□ 0.28
HLA-DPB1P04440 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 AL121906.2-201ENST00000621597 723 ntBASIC16.82■□□□□ 0.28
HLA-DPB1P04440 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DPB1P04440 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 PKD1P1-201ENST00000458669 6805 ntBASIC16.81■□□□□ 0.28
HLA-DPB1P04440 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms