Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.67■□□□□ 0.42
MT-ND1P03886 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND1P03886 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND1P03886 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND1P03886 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND1P03886 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
MT-ND1P03886 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND1P03886 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND1P03886 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
MT-ND1P03886 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND1P03886 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
MT-ND1P03886 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND1P03886 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND1P03886 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.66■□□□□ 0.42
MT-ND1P03886 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND1P03886 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND1P03886 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND1P03886 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND1P03886 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND1P03886 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.66■□□□□ 0.42
MT-ND1P03886 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
MT-ND1P03886 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND1P03886 ESPNP-201ENST00000270691 2015 ntBASIC17.66■□□□□ 0.42
MT-ND1P03886 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND1P03886 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND1P03886 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.66■□□□□ 0.42
MT-ND1P03886 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND1P03886 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND1P03886 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.66■□□□□ 0.42
MT-ND1P03886 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.66■□□□□ 0.42
MT-ND1P03886 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.66■□□□□ 0.42
MT-ND1P03886 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.66■□□□□ 0.42
MT-ND1P03886 PNMA6B-201ENST00000538162 1200 ntBASIC17.66■□□□□ 0.42
MT-ND1P03886 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.66■□□□□ 0.42
MT-ND1P03886 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
MT-ND1P03886 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND1P03886 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND1P03886 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND1P03886 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND1P03886 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.66■□□□□ 0.42
MT-ND1P03886 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND1P03886 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND1P03886 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.66■□□□□ 0.42
MT-ND1P03886 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.66■□□□□ 0.42
MT-ND1P03886 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.66■□□□□ 0.42
MT-ND1P03886 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND1P03886 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
MT-ND1P03886 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.65■□□□□ 0.42
MT-ND1P03886 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND1P03886 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND1P03886 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND1P03886 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
MT-ND1P03886 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND1P03886 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND1P03886 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
MT-ND1P03886 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND1P03886 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND1P03886 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
MT-ND1P03886 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND1P03886 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MT-ND1P03886 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND1P03886 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
MT-ND1P03886 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MT-ND1P03886 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.65■□□□□ 0.42
MT-ND1P03886 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.65■□□□□ 0.42
MT-ND1P03886 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.65■□□□□ 0.42
MT-ND1P03886 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.65■□□□□ 0.42
MT-ND1P03886 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
MT-ND1P03886 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND1P03886 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND1P03886 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MT-ND1P03886 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MT-ND1P03886 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
MT-ND1P03886 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.65■□□□□ 0.42
MT-ND1P03886 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND1P03886 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND1P03886 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND1P03886 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND1P03886 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND1P03886 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND1P03886 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND1P03886 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND1P03886 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND1P03886 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
MT-ND1P03886 BCL2-203ENST00000589955 5011 ntBASIC17.64■□□□□ 0.42
MT-ND1P03886 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
MT-ND1P03886 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
MT-ND1P03886 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
MT-ND1P03886 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
MT-ND1P03886 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-ND1P03886 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.64■□□□□ 0.41
MT-ND1P03886 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.64■□□□□ 0.41
MT-ND1P03886 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.64■□□□□ 0.41
MT-ND1P03886 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.64■□□□□ 0.41
MT-ND1P03886 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
MT-ND1P03886 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MT-ND1P03886 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
MT-ND1P03886 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MT-ND1P03886 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
MT-ND1P03886 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms