Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT6AP02538 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.16■□□□□ 0.5
KRT6AP02538 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.16■□□□□ 0.5
KRT6AP02538 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.16■□□□□ 0.5
KRT6AP02538 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KRT6AP02538 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT6AP02538 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT6AP02538 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KRT6AP02538 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
KRT6AP02538 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT6AP02538 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.16■□□□□ 0.5
KRT6AP02538 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.16■□□□□ 0.5
KRT6AP02538 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT6AP02538 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT6AP02538 KRT8P32-201ENST00000512863 1461 ntBASIC18.15■□□□□ 0.5
KRT6AP02538 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT6AP02538 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KRT6AP02538 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT6AP02538 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
KRT6AP02538 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
KRT6AP02538 AC068587.9-201ENST00000641814 219 ntBASIC18.15■□□□□ 0.5
KRT6AP02538 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
KRT6AP02538 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT6AP02538 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.15■□□□□ 0.5
KRT6AP02538 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT6AP02538 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT6AP02538 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.15■□□□□ 0.5
KRT6AP02538 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
KRT6AP02538 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT6AP02538 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
KRT6AP02538 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT6AP02538 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.15■□□□□ 0.5
KRT6AP02538 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT6AP02538 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
KRT6AP02538 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT6AP02538 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRT6AP02538 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT6AP02538 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT6AP02538 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT6AP02538 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.14■□□□□ 0.49
KRT6AP02538 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
KRT6AP02538 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT6AP02538 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
KRT6AP02538 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.14■□□□□ 0.49
KRT6AP02538 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRT6AP02538 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.14■□□□□ 0.49
KRT6AP02538 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.14■□□□□ 0.49
KRT6AP02538 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
KRT6AP02538 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.14■□□□□ 0.49
KRT6AP02538 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRT6AP02538 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.14■□□□□ 0.49
KRT6AP02538 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.14■□□□□ 0.49
KRT6AP02538 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT6AP02538 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
KRT6AP02538 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT6AP02538 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.14■□□□□ 0.49
KRT6AP02538 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT6AP02538 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT6AP02538 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT6AP02538 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRT6AP02538 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT6AP02538 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.13■□□□□ 0.49
KRT6AP02538 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT6AP02538 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT6AP02538 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT6AP02538 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT6AP02538 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
KRT6AP02538 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.13■□□□□ 0.49
KRT6AP02538 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.13■□□□□ 0.49
KRT6AP02538 AC135050.7-201ENST00000624508 2218 ntBASIC18.13■□□□□ 0.49
KRT6AP02538 FAM207BP-201ENST00000447172 505 ntBASIC18.13■□□□□ 0.49
KRT6AP02538 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.13■□□□□ 0.49
KRT6AP02538 AC073592.3-201ENST00000625118 1834 ntBASIC18.13■□□□□ 0.49
KRT6AP02538 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
KRT6AP02538 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KRT6AP02538 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
KRT6AP02538 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.13■□□□□ 0.49
KRT6AP02538 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.13■□□□□ 0.49
KRT6AP02538 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT6AP02538 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT6AP02538 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KRT6AP02538 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT6AP02538 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT6AP02538 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT6AP02538 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.12■□□□□ 0.49
KRT6AP02538 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT6AP02538 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT6AP02538 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
KRT6AP02538 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT6AP02538 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.12■□□□□ 0.49
KRT6AP02538 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT6AP02538 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT6AP02538 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT6AP02538 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT6AP02538 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT6AP02538 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
KRT6AP02538 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
KRT6AP02538 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.12■□□□□ 0.49
KRT6AP02538 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
KRT6AP02538 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms