Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TOP3BO95985 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TOP3BO95985 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TOP3BO95985 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TOP3BO95985 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TOP3BO95985 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TOP3BO95985 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TOP3BO95985 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.17■□□□□ 0.66
TOP3BO95985 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TOP3BO95985 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TOP3BO95985 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.17■□□□□ 0.66
TOP3BO95985 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TOP3BO95985 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TOP3BO95985 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TOP3BO95985 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TOP3BO95985 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.17■□□□□ 0.66
TOP3BO95985 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TOP3BO95985 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.17■□□□□ 0.66
TOP3BO95985 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TOP3BO95985 AL121906.2-201ENST00000621597 723 ntBASIC19.17■□□□□ 0.66
TOP3BO95985 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.17■□□□□ 0.66
TOP3BO95985 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
TOP3BO95985 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TOP3BO95985 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TOP3BO95985 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TOP3BO95985 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TOP3BO95985 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TOP3BO95985 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.17■□□□□ 0.66
TOP3BO95985 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TOP3BO95985 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TOP3BO95985 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TOP3BO95985 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TOP3BO95985 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TOP3BO95985 AC026471.1-201ENST00000564629 3026 ntBASIC19.17■□□□□ 0.66
TOP3BO95985 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.16■□□□□ 0.66
TOP3BO95985 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.16■□□□□ 0.66
TOP3BO95985 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TOP3BO95985 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TOP3BO95985 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TOP3BO95985 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TOP3BO95985 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TOP3BO95985 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TOP3BO95985 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TOP3BO95985 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
TOP3BO95985 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TOP3BO95985 FAM86EP-206ENST00000510506 987 ntBASIC19.16■□□□□ 0.66
TOP3BO95985 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.16■□□□□ 0.66
TOP3BO95985 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.16■□□□□ 0.66
TOP3BO95985 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TOP3BO95985 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TOP3BO95985 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.16■□□□□ 0.66
TOP3BO95985 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.16■□□□□ 0.66
TOP3BO95985 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TOP3BO95985 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TOP3BO95985 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TOP3BO95985 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.16■□□□□ 0.66
TOP3BO95985 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TOP3BO95985 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.16■□□□□ 0.66
TOP3BO95985 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TOP3BO95985 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.16■□□□□ 0.66
TOP3BO95985 AC018470.1-201ENST00000624790 3129 ntBASIC19.16■□□□□ 0.66
TOP3BO95985 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TOP3BO95985 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TOP3BO95985 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.15■□□□□ 0.66
TOP3BO95985 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.15■□□□□ 0.66
TOP3BO95985 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.15■□□□□ 0.66
TOP3BO95985 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TOP3BO95985 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TOP3BO95985 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TOP3BO95985 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TOP3BO95985 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.15■□□□□ 0.66
TOP3BO95985 WIZP1-201ENST00000531444 2299 ntBASIC19.15■□□□□ 0.66
TOP3BO95985 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.15■□□□□ 0.66
TOP3BO95985 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TOP3BO95985 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.15■□□□□ 0.66
TOP3BO95985 RNF152P1-201ENST00000397754 604 ntBASIC19.15■□□□□ 0.66
TOP3BO95985 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TOP3BO95985 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.15■□□□□ 0.66
TOP3BO95985 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.15■□□□□ 0.66
TOP3BO95985 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.15■□□□□ 0.66
TOP3BO95985 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.15■□□□□ 0.66
TOP3BO95985 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.15■□□□□ 0.66
TOP3BO95985 AC012313.10-201ENST00000623509 926 ntBASIC19.15■□□□□ 0.66
TOP3BO95985 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TOP3BO95985 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.15■□□□□ 0.66
TOP3BO95985 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.15■□□□□ 0.66
TOP3BO95985 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.15■□□□□ 0.66
TOP3BO95985 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TOP3BO95985 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TOP3BO95985 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.15■□□□□ 0.66
TOP3BO95985 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TOP3BO95985 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TOP3BO95985 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.15■□□□□ 0.66
TOP3BO95985 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TOP3BO95985 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.66
TOP3BO95985 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.14■□□□□ 0.65
TOP3BO95985 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.14■□□□□ 0.65
TOP3BO95985 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.14■□□□□ 0.65
TOP3BO95985 AC005332.8-201ENST00000622750 2735 ntBASIC19.14■□□□□ 0.65
TOP3BO95985 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms