Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.65■□□□□ 0.58
CBX6O95503 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CBX6O95503 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CBX6O95503 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.65■□□□□ 0.58
CBX6O95503 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.65■□□□□ 0.58
CBX6O95503 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.65■□□□□ 0.58
CBX6O95503 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CBX6O95503 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CBX6O95503 SOX15-203ENST00000570788 1093 ntBASIC18.65■□□□□ 0.58
CBX6O95503 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.65■□□□□ 0.58
CBX6O95503 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CBX6O95503 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.65■□□□□ 0.58
CBX6O95503 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.65■□□□□ 0.58
CBX6O95503 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
CBX6O95503 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CBX6O95503 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CBX6O95503 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CBX6O95503 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CBX6O95503 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CBX6O95503 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CBX6O95503 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CBX6O95503 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CBX6O95503 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CBX6O95503 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX6O95503 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX6O95503 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX6O95503 PRORSD1P-202ENST00000563365 2154 ntBASIC18.64■□□□□ 0.57
CBX6O95503 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX6O95503 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX6O95503 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CBX6O95503 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX6O95503 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX6O95503 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX6O95503 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX6O95503 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.64■□□□□ 0.57
CBX6O95503 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CBX6O95503 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CBX6O95503 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
CBX6O95503 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX6O95503 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CBX6O95503 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX6O95503 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX6O95503 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CBX6O95503 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX6O95503 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX6O95503 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX6O95503 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX6O95503 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX6O95503 AC018553.1-201ENST00000616682 1458 ntBASIC18.64■□□□□ 0.57
CBX6O95503 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX6O95503 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX6O95503 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.63■□□□□ 0.57
CBX6O95503 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CBX6O95503 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX6O95503 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX6O95503 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.63■□□□□ 0.57
CBX6O95503 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CBX6O95503 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.63■□□□□ 0.57
CBX6O95503 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.63■□□□□ 0.57
CBX6O95503 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CBX6O95503 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX6O95503 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.63■□□□□ 0.57
CBX6O95503 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CBX6O95503 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX6O95503 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CBX6O95503 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX6O95503 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX6O95503 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX6O95503 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.63■□□□□ 0.57
CBX6O95503 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.63■□□□□ 0.57
CBX6O95503 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.63■□□□□ 0.57
CBX6O95503 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
CBX6O95503 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.63■□□□□ 0.57
CBX6O95503 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX6O95503 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CBX6O95503 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
CBX6O95503 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.63■□□□□ 0.57
CBX6O95503 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX6O95503 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX6O95503 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.63■□□□□ 0.57
CBX6O95503 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CBX6O95503 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.63■□□□□ 0.57
CBX6O95503 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX6O95503 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX6O95503 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX6O95503 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX6O95503 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX6O95503 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX6O95503 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX6O95503 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CBX6O95503 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX6O95503 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX6O95503 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.62■□□□□ 0.57
CBX6O95503 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBX6O95503 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBX6O95503 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBX6O95503 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBX6O95503 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBX6O95503 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBX6O95503 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms