Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
UPK1BO75841 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
UPK1BO75841 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
UPK1BO75841 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
UPK1BO75841 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
UPK1BO75841 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
UPK1BO75841 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
UPK1BO75841 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
UPK1BO75841 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UPK1BO75841 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
UPK1BO75841 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UPK1BO75841 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UPK1BO75841 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
UPK1BO75841 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UPK1BO75841 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
UPK1BO75841 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.33■□□□□ 0.2
UPK1BO75841 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.33■□□□□ 0.2
UPK1BO75841 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UPK1BO75841 HSD17B1P1-201ENST00000590052 955 ntBASIC16.33■□□□□ 0.2
UPK1BO75841 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
UPK1BO75841 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.33■□□□□ 0.2
UPK1BO75841 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.33■□□□□ 0.2
UPK1BO75841 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UPK1BO75841 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
UPK1BO75841 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
UPK1BO75841 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
UPK1BO75841 CYP21A1P-202ENST00000354927 1481 ntBASIC16.33■□□□□ 0.2
UPK1BO75841 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
UPK1BO75841 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
UPK1BO75841 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
UPK1BO75841 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
UPK1BO75841 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.33■□□□□ 0.2
UPK1BO75841 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UPK1BO75841 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.33■□□□□ 0.2
UPK1BO75841 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
UPK1BO75841 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UPK1BO75841 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UPK1BO75841 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UPK1BO75841 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UPK1BO75841 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UPK1BO75841 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.32■□□□□ 0.2
UPK1BO75841 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1BO75841 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1BO75841 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
UPK1BO75841 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1BO75841 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1BO75841 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1BO75841 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1BO75841 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1BO75841 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1BO75841 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1BO75841 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.32■□□□□ 0.2
UPK1BO75841 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
UPK1BO75841 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.32■□□□□ 0.2
UPK1BO75841 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.32■□□□□ 0.2
UPK1BO75841 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1BO75841 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.32■□□□□ 0.2
UPK1BO75841 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.32■□□□□ 0.2
UPK1BO75841 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1BO75841 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.32■□□□□ 0.2
UPK1BO75841 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1BO75841 AC233992.3-201ENST00000607491 485 ntBASIC16.32■□□□□ 0.2
UPK1BO75841 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1BO75841 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1BO75841 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1BO75841 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.32■□□□□ 0.2
UPK1BO75841 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1BO75841 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UPK1BO75841 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
UPK1BO75841 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
UPK1BO75841 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
UPK1BO75841 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1BO75841 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
UPK1BO75841 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1BO75841 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1BO75841 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1BO75841 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1BO75841 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1BO75841 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1BO75841 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1BO75841 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1BO75841 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1BO75841 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.31■□□□□ 0.2
UPK1BO75841 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.31■□□□□ 0.2
UPK1BO75841 AL512631.2-201ENST00000604634 923 ntBASIC16.31■□□□□ 0.2
UPK1BO75841 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1BO75841 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1BO75841 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1BO75841 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1BO75841 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.31■□□□□ 0.2
UPK1BO75841 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.31■□□□□ 0.2
UPK1BO75841 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK1BO75841 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
UPK1BO75841 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1BO75841 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK1BO75841 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.3■□□□□ 0.2
UPK1BO75841 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.3■□□□□ 0.2
UPK1BO75841 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.3■□□□□ 0.2
UPK1BO75841 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
UPK1BO75841 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms