Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.77■□□□□ 0.6
GPC4O75487 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPC4O75487 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
GPC4O75487 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPC4O75487 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPC4O75487 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPC4O75487 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
GPC4O75487 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
GPC4O75487 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPC4O75487 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPC4O75487 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.77■□□□□ 0.6
GPC4O75487 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPC4O75487 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
GPC4O75487 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.77■□□□□ 0.6
GPC4O75487 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.77■□□□□ 0.6
GPC4O75487 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.77■□□□□ 0.6
GPC4O75487 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.77■□□□□ 0.6
GPC4O75487 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.77■□□□□ 0.6
GPC4O75487 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
GPC4O75487 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.77■□□□□ 0.6
GPC4O75487 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.77■□□□□ 0.6
GPC4O75487 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.77■□□□□ 0.6
GPC4O75487 AC066615.1-201ENST00000640911 628 ntBASIC18.77■□□□□ 0.6
GPC4O75487 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.77■□□□□ 0.6
GPC4O75487 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GPC4O75487 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPC4O75487 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
GPC4O75487 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPC4O75487 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPC4O75487 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.77■□□□□ 0.6
GPC4O75487 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.77■□□□□ 0.59
GPC4O75487 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.77■□□□□ 0.59
GPC4O75487 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GPC4O75487 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPC4O75487 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GPC4O75487 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.76■□□□□ 0.59
GPC4O75487 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.76■□□□□ 0.59
GPC4O75487 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.76■□□□□ 0.59
GPC4O75487 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPC4O75487 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPC4O75487 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
GPC4O75487 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPC4O75487 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.76■□□□□ 0.59
GPC4O75487 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPC4O75487 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPC4O75487 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPC4O75487 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.76■□□□□ 0.59
GPC4O75487 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.76■□□□□ 0.59
GPC4O75487 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.76■□□□□ 0.59
GPC4O75487 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.76■□□□□ 0.59
GPC4O75487 AC026471.5-201ENST00000615068 467 ntBASIC18.76■□□□□ 0.59
GPC4O75487 AC011298.2-201ENST00000617989 482 ntBASIC18.76■□□□□ 0.59
GPC4O75487 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPC4O75487 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPC4O75487 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.76■□□□□ 0.59
GPC4O75487 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPC4O75487 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPC4O75487 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.76■□□□□ 0.59
GPC4O75487 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPC4O75487 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
GPC4O75487 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.76■□□□□ 0.59
GPC4O75487 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
GPC4O75487 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.75■□□□□ 0.59
GPC4O75487 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GPC4O75487 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.75■□□□□ 0.59
GPC4O75487 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GPC4O75487 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GPC4O75487 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
GPC4O75487 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GPC4O75487 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GPC4O75487 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.75■□□□□ 0.59
GPC4O75487 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
GPC4O75487 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
GPC4O75487 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.75■□□□□ 0.59
GPC4O75487 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
GPC4O75487 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.75■□□□□ 0.59
GPC4O75487 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GPC4O75487 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GPC4O75487 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.75■□□□□ 0.59
GPC4O75487 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GPC4O75487 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
GPC4O75487 AC007613.1-201ENST00000572811 2597 ntBASIC18.75■□□□□ 0.59
GPC4O75487 KRT8P11-201ENST00000409686 1436 ntBASIC18.74■□□□□ 0.59
GPC4O75487 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
GPC4O75487 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPC4O75487 IRX1P1-201ENST00000438849 1838 ntBASIC18.74■□□□□ 0.59
GPC4O75487 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.74■□□□□ 0.59
GPC4O75487 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
GPC4O75487 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GPC4O75487 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPC4O75487 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.74■□□□□ 0.59
GPC4O75487 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPC4O75487 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPC4O75487 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GPC4O75487 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPC4O75487 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPC4O75487 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPC4O75487 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
GPC4O75487 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.74■□□□□ 0.59
GPC4O75487 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms