Protein–RNA interactions for Protein: O60516

EIF4EBP3, Eukaryotic translation initiation factor 4E-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 100 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4EBP3O60516 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC12.49□□□□□ -0.41
EIF4EBP3O60516 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EIF4EBP3O60516 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC12.49□□□□□ -0.41
EIF4EBP3O60516 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EIF4EBP3O60516 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
EIF4EBP3O60516 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC12.49□□□□□ -0.41
EIF4EBP3O60516 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
EIF4EBP3O60516 KRT18P68-201ENST00000392293 1000 ntBASIC12.49□□□□□ -0.41
EIF4EBP3O60516 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EIF4EBP3O60516 TERF1P5-201ENST00000477545 1207 ntBASIC12.49□□□□□ -0.41
EIF4EBP3O60516 PLLP-204ENST00000569059 665 ntTSL 3 BASIC12.49□□□□□ -0.41
EIF4EBP3O60516 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC12.49□□□□□ -0.41
EIF4EBP3O60516 MYCNOS-205ENST00000641950 531 ntBASIC12.49□□□□□ -0.41
EIF4EBP3O60516 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
EIF4EBP3O60516 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EIF4EBP3O60516 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC12.49□□□□□ -0.41
EIF4EBP3O60516 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EIF4EBP3O60516 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
EIF4EBP3O60516 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC12.49□□□□□ -0.41
EIF4EBP3O60516 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
EIF4EBP3O60516 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EIF4EBP3O60516 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EIF4EBP3O60516 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EIF4EBP3O60516 FLYWCH1P1-201ENST00000460917 1874 ntBASIC12.48□□□□□ -0.41
EIF4EBP3O60516 AC093677.2-201ENST00000600169 1863 ntBASIC12.48□□□□□ -0.41
EIF4EBP3O60516 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 STOX2-205ENST00000513034 807 ntTSL 3 BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 KRT18P61-201ENST00000585825 1298 ntBASIC12.48□□□□□ -0.41
EIF4EBP3O60516 AC060766.1-201ENST00000590824 627 ntBASIC12.48□□□□□ -0.41
EIF4EBP3O60516 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 HARS-201ENST00000307633 1780 ntTSL 2 BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC12.48□□□□□ -0.41
EIF4EBP3O60516 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 AL691447.1-201ENST00000419456 387 ntBASIC12.47□□□□□ -0.41
EIF4EBP3O60516 PBX1-209ENST00000485769 834 ntTSL 2 BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 HMGB3P14-201ENST00000494195 599 ntBASIC12.47□□□□□ -0.41
EIF4EBP3O60516 AC091917.2-201ENST00000505002 744 ntBASIC12.47□□□□□ -0.41
EIF4EBP3O60516 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EIF4EBP3O60516 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms