Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.54■□□□□ 0.56
PCDHGA12O60330 AC092329.2-201ENST00000598402 547 ntBASIC18.54■□□□□ 0.56
PCDHGA12O60330 AC092119.3-201ENST00000612618 583 ntBASIC18.54■□□□□ 0.56
PCDHGA12O60330 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PCDHGA12O60330 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA12O60330 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHGA12O60330 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGA12O60330 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA12O60330 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA12O60330 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA12O60330 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA12O60330 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHGA12O60330 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDHGA12O60330 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA12O60330 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA12O60330 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA12O60330 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA12O60330 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA12O60330 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA12O60330 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA12O60330 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA12O60330 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA12O60330 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDHGA12O60330 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA12O60330 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHGA12O60330 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDHGA12O60330 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA12O60330 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHGA12O60330 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
PCDHGA12O60330 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.53■□□□□ 0.56
PCDHGA12O60330 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA12O60330 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
PCDHGA12O60330 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA12O60330 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PCDHGA12O60330 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA12O60330 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA12O60330 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA12O60330 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA12O60330 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA12O60330 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA12O60330 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA12O60330 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA12O60330 AC005332.7-201ENST00000614046 2005 ntBASIC18.52■□□□□ 0.56
PCDHGA12O60330 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA12O60330 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PCDHGA12O60330 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDHGA12O60330 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA12O60330 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDHGA12O60330 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA12O60330 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA12O60330 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA12O60330 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA12O60330 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA12O60330 TSPY21P-201ENST00000433481 731 ntBASIC18.52■□□□□ 0.56
PCDHGA12O60330 TSPY23P-201ENST00000440136 739 ntBASIC18.52■□□□□ 0.56
PCDHGA12O60330 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.52■□□□□ 0.56
PCDHGA12O60330 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.52■□□□□ 0.56
PCDHGA12O60330 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.52■□□□□ 0.56
PCDHGA12O60330 AL121672.3-201ENST00000608644 468 ntBASIC18.52■□□□□ 0.56
PCDHGA12O60330 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHGA12O60330 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA12O60330 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PCDHGA12O60330 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA12O60330 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA12O60330 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.52■□□□□ 0.55
PCDHGA12O60330 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHGA12O60330 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHGA12O60330 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHGA12O60330 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHGA12O60330 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA12O60330 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PCDHGA12O60330 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA12O60330 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA12O60330 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHGA12O60330 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
PCDHGA12O60330 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PCDHGA12O60330 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PCDHGA12O60330 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA12O60330 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHGA12O60330 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA12O60330 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA12O60330 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA12O60330 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA12O60330 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA12O60330 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA12O60330 AC104417.2-201ENST00000562989 1793 ntBASIC18.51■□□□□ 0.55
PCDHGA12O60330 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA12O60330 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PCDHGA12O60330 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHGA12O60330 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA12O60330 TSSC2-201ENST00000450217 709 ntBASIC18.51■□□□□ 0.55
PCDHGA12O60330 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PCDHGA12O60330 AC092597.1-201ENST00000487352 616 ntBASIC18.51■□□□□ 0.55
PCDHGA12O60330 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHGA12O60330 PRELID1P1-202ENST00000567272 903 ntBASIC18.51■□□□□ 0.55
PCDHGA12O60330 AC011498.5-201ENST00000592027 486 ntBASIC18.51■□□□□ 0.55
PCDHGA12O60330 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PCDHGA12O60330 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PCDHGA12O60330 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA12O60330 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms