Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF13O43567 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF13O43567 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF13O43567 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF13O43567 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
RNF13O43567 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF13O43567 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF13O43567 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF13O43567 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF13O43567 AC004980.1-204ENST00000429707 299 ntBASIC17.06■□□□□ 0.32
RNF13O43567 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.06■□□□□ 0.32
RNF13O43567 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF13O43567 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF13O43567 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.06■□□□□ 0.32
RNF13O43567 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RNF13O43567 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.06■□□□□ 0.32
RNF13O43567 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF13O43567 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF13O43567 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF13O43567 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF13O43567 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF13O43567 NOC2LP1-202ENST00000452600 2235 ntBASIC17.06■□□□□ 0.32
RNF13O43567 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF13O43567 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF13O43567 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF13O43567 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF13O43567 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF13O43567 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF13O43567 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
RNF13O43567 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF13O43567 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
RNF13O43567 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF13O43567 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF13O43567 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF13O43567 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF13O43567 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF13O43567 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF13O43567 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RNF13O43567 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.05■□□□□ 0.32
RNF13O43567 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF13O43567 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.05■□□□□ 0.32
RNF13O43567 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF13O43567 RARRES2P10-201ENST00000564312 460 ntBASIC17.05■□□□□ 0.32
RNF13O43567 AF186192.3-201ENST00000583427 947 ntBASIC17.05■□□□□ 0.32
RNF13O43567 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.05■□□□□ 0.32
RNF13O43567 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF13O43567 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF13O43567 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF13O43567 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF13O43567 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF13O43567 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF13O43567 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF13O43567 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF13O43567 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF13O43567 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF13O43567 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RNF13O43567 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF13O43567 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF13O43567 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF13O43567 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF13O43567 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF13O43567 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF13O43567 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF13O43567 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF13O43567 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF13O43567 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF13O43567 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF13O43567 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF13O43567 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF13O43567 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF13O43567 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF13O43567 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF13O43567 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF13O43567 AC142381.4-202ENST00000563973 229 ntBASIC17.04■□□□□ 0.32
RNF13O43567 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.04■□□□□ 0.32
RNF13O43567 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF13O43567 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF13O43567 AL031985.4-201ENST00000642138 673 ntBASIC17.04■□□□□ 0.32
RNF13O43567 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF13O43567 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF13O43567 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF13O43567 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF13O43567 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF13O43567 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF13O43567 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF13O43567 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF13O43567 NOC2LP2-201ENST00000407594 1944 ntBASIC17.04■□□□□ 0.32
RNF13O43567 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF13O43567 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF13O43567 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RNF13O43567 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF13O43567 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF13O43567 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF13O43567 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF13O43567 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RNF13O43567 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF13O43567 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF13O43567 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF13O43567 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RNF13O43567 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms