Protein–RNA interactions for Protein: O15534

PER1, Period circadian protein homolog 1, humanhuman

Predicted RBP Predictions only

Length 1,290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER1O15534 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PER1O15534 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
PER1O15534 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PER1O15534 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PER1O15534 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC25.39■■□□□ 1.66
PER1O15534 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PER1O15534 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PER1O15534 FAM8A6P-201ENST00000407496 1135 ntBASIC25.39■■□□□ 1.66
PER1O15534 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
PER1O15534 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC25.39■■□□□ 1.66
PER1O15534 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC25.39■■□□□ 1.66
PER1O15534 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
PER1O15534 HYMAI.1-201ENST00000620949 238 ntBASIC25.39■■□□□ 1.66
PER1O15534 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PER1O15534 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
PER1O15534 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
PER1O15534 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
PER1O15534 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
PER1O15534 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
PER1O15534 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
PER1O15534 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PER1O15534 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC25.38■■□□□ 1.65
PER1O15534 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC25.38■■□□□ 1.65
PER1O15534 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
PER1O15534 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PER1O15534 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
PER1O15534 AC112777.1-201ENST00000540175 1423 ntBASIC25.38■■□□□ 1.65
PER1O15534 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC25.38■■□□□ 1.65
PER1O15534 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PER1O15534 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PER1O15534 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC25.38■■□□□ 1.65
PER1O15534 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC25.38■■□□□ 1.65
PER1O15534 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PER1O15534 MYLKP1-201ENST00000509077 1580 ntBASIC25.38■■□□□ 1.65
PER1O15534 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PER1O15534 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PER1O15534 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PER1O15534 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
PER1O15534 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC25.38■■□□□ 1.65
PER1O15534 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PER1O15534 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PER1O15534 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PER1O15534 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC25.37■■□□□ 1.65
PER1O15534 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC25.37■■□□□ 1.65
PER1O15534 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC25.37■■□□□ 1.65
PER1O15534 AC126763.1-201ENST00000552015 2118 ntBASIC25.37■■□□□ 1.65
PER1O15534 AC005082.1-201ENST00000413042 2259 ntBASIC25.37■■□□□ 1.65
PER1O15534 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PER1O15534 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PER1O15534 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
PER1O15534 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
PER1O15534 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PER1O15534 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
PER1O15534 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
PER1O15534 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC25.37■■□□□ 1.65
PER1O15534 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC25.37■■□□□ 1.65
PER1O15534 ANKRD20A18P-201ENST00000359341 492 ntBASIC25.37■■□□□ 1.65
PER1O15534 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PER1O15534 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC25.37■■□□□ 1.65
PER1O15534 SPDYE15P-201ENST00000424157 909 ntBASIC25.37■■□□□ 1.65
PER1O15534 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PER1O15534 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PER1O15534 SNX5-210ENST00000481323 562 ntTSL 3 BASIC25.37■■□□□ 1.65
PER1O15534 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC25.37■■□□□ 1.65
PER1O15534 MIR3917-201ENST00000580971 93 ntBASIC25.37■■□□□ 1.65
PER1O15534 MYC-208ENST00000641036 567 ntBASIC25.37■■□□□ 1.65
PER1O15534 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC25.37■■□□□ 1.65
PER1O15534 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC25.37■■□□□ 1.65
PER1O15534 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PER1O15534 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PER1O15534 WIZP1-201ENST00000531444 2299 ntBASIC25.37■■□□□ 1.65
PER1O15534 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC25.37■■□□□ 1.65
PER1O15534 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC25.37■■□□□ 1.65
PER1O15534 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PER1O15534 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PER1O15534 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC25.36■■□□□ 1.65
PER1O15534 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PER1O15534 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PER1O15534 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC25.36■■□□□ 1.65
PER1O15534 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PER1O15534 AP000593.1-201ENST00000393668 712 ntBASIC25.36■■□□□ 1.65
PER1O15534 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PER1O15534 GRAMD4P1-201ENST00000435181 1110 ntBASIC25.36■■□□□ 1.65
PER1O15534 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC25.36■■□□□ 1.65
PER1O15534 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC25.36■■□□□ 1.65
PER1O15534 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC25.36■■□□□ 1.65
PER1O15534 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC25.36■■□□□ 1.65
PER1O15534 AC010240.3-201ENST00000607688 395 ntBASIC25.36■■□□□ 1.65
PER1O15534 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC25.36■■□□□ 1.65
PER1O15534 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PER1O15534 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PER1O15534 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PER1O15534 AL163051.1-201ENST00000569214 1512 ntBASIC25.36■■□□□ 1.65
PER1O15534 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
PER1O15534 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC25.36■■□□□ 1.65
PER1O15534 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PER1O15534 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC25.35■■□□□ 1.65
PER1O15534 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
PER1O15534 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
PER1O15534 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms