Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC30.28■■■□□ 2.44
CHD1O14646 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC30.28■■■□□ 2.44
CHD1O14646 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CHD1O14646 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CHD1O14646 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC30.28■■■□□ 2.44
CHD1O14646 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC30.28■■■□□ 2.44
CHD1O14646 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC30.28■■■□□ 2.44
CHD1O14646 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CHD1O14646 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
CHD1O14646 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC30.28■■■□□ 2.44
CHD1O14646 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC30.28■■■□□ 2.44
CHD1O14646 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CHD1O14646 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CHD1O14646 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CHD1O14646 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CHD1O14646 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC30.27■■■□□ 2.44
CHD1O14646 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
CHD1O14646 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC30.27■■■□□ 2.44
CHD1O14646 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
CHD1O14646 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC30.27■■■□□ 2.44
CHD1O14646 AL139288.1-201ENST00000623748 933 ntBASIC30.27■■■□□ 2.44
CHD1O14646 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CHD1O14646 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
CHD1O14646 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CHD1O14646 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC30.27■■■□□ 2.44
CHD1O14646 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC30.27■■■□□ 2.44
CHD1O14646 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CHD1O14646 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
CHD1O14646 MEG3-211ENST00000452514 461 ntTSL 3 BASIC30.27■■■□□ 2.44
CHD1O14646 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC30.27■■■□□ 2.44
CHD1O14646 KATNBL1P6-202ENST00000562413 1466 ntBASIC30.27■■■□□ 2.44
CHD1O14646 INTS4P1-201ENST00000438455 1935 ntBASIC30.26■■■□□ 2.44
CHD1O14646 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC30.26■■■□□ 2.44
CHD1O14646 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC30.26■■■□□ 2.44
CHD1O14646 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.44
CHD1O14646 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
CHD1O14646 CYP51A1P1-201ENST00000492267 1507 ntBASIC30.26■■■□□ 2.43
CHD1O14646 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
CHD1O14646 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
CHD1O14646 AC034236.2-201ENST00000606662 1610 ntBASIC30.26■■■□□ 2.43
CHD1O14646 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.43
CHD1O14646 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC30.26■■■□□ 2.43
CHD1O14646 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC30.26■■■□□ 2.43
CHD1O14646 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
CHD1O14646 MTDHP5-201ENST00000598980 586 ntBASIC30.26■■■□□ 2.43
CHD1O14646 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC30.26■■■□□ 2.43
CHD1O14646 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
CHD1O14646 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC30.26■■■□□ 2.43
CHD1O14646 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC30.25■■■□□ 2.43
CHD1O14646 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC30.25■■■□□ 2.43
CHD1O14646 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC30.25■■■□□ 2.43
CHD1O14646 CENPM-204ENST00000402420 688 ntTSL 5 BASIC30.25■■■□□ 2.43
CHD1O14646 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CHD1O14646 RBSN-204ENST00000449050 903 ntTSL 2 BASIC30.25■■■□□ 2.43
CHD1O14646 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC30.25■■■□□ 2.43
CHD1O14646 AL138831.2-201ENST00000606564 490 ntBASIC30.25■■■□□ 2.43
CHD1O14646 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC30.25■■■□□ 2.43
CHD1O14646 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC30.25■■■□□ 2.43
CHD1O14646 AL512353.2-201ENST00000448759 1962 ntBASIC30.25■■■□□ 2.43
CHD1O14646 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC30.25■■■□□ 2.43
CHD1O14646 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CHD1O14646 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CHD1O14646 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
CHD1O14646 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
CHD1O14646 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CHD1O14646 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
CHD1O14646 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC30.25■■■□□ 2.43
CHD1O14646 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CHD1O14646 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC30.24■■■□□ 2.43
CHD1O14646 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC30.24■■■□□ 2.43
CHD1O14646 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
CHD1O14646 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
CHD1O14646 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC30.24■■■□□ 2.43
CHD1O14646 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CHD1O14646 AC006333.2-201ENST00000607957 2099 ntBASIC30.24■■■□□ 2.43
CHD1O14646 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CHD1O14646 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC30.24■■■□□ 2.43
CHD1O14646 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CHD1O14646 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CHD1O14646 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC30.24■■■□□ 2.43
CHD1O14646 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC30.24■■■□□ 2.43
CHD1O14646 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC30.24■■■□□ 2.43
CHD1O14646 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CHD1O14646 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC30.23■■■□□ 2.43
CHD1O14646 AC244107.1-201ENST00000442033 332 ntBASIC30.23■■■□□ 2.43
CHD1O14646 REEP1-209ENST00000541910 969 ntTSL 2 BASIC30.23■■■□□ 2.43
CHD1O14646 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC30.23■■■□□ 2.43
CHD1O14646 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CHD1O14646 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CHD1O14646 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC30.23■■■□□ 2.43
CHD1O14646 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CHD1O14646 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
CHD1O14646 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CHD1O14646 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
CHD1O14646 AC009947.1-201ENST00000444350 727 ntBASIC30.22■■■□□ 2.43
CHD1O14646 AC092364.2-202ENST00000597012 1073 ntBASIC30.22■■■□□ 2.43
CHD1O14646 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC30.22■■■□□ 2.43
CHD1O14646 AC079834.2-201ENST00000609776 1949 ntBASIC30.22■■■□□ 2.43
CHD1O14646 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CHD1O14646 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC30.22■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms