Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
UBFD1O14562 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBFD1O14562 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBFD1O14562 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBFD1O14562 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBFD1O14562 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBFD1O14562 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBFD1O14562 AC004951.3-201ENST00000418645 1148 ntBASIC18.18■□□□□ 0.5
UBFD1O14562 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBFD1O14562 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.18■□□□□ 0.5
UBFD1O14562 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.18■□□□□ 0.5
UBFD1O14562 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBFD1O14562 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.18■□□□□ 0.5
UBFD1O14562 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBFD1O14562 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.18■□□□□ 0.5
UBFD1O14562 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBFD1O14562 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.18■□□□□ 0.5
UBFD1O14562 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.18■□□□□ 0.5
UBFD1O14562 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBFD1O14562 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
UBFD1O14562 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBFD1O14562 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.18■□□□□ 0.5
UBFD1O14562 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.18■□□□□ 0.5
UBFD1O14562 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBFD1O14562 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBFD1O14562 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBFD1O14562 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
UBFD1O14562 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBFD1O14562 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
UBFD1O14562 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBFD1O14562 KRT8P45-201ENST00000414328 1447 ntBASIC18.17■□□□□ 0.5
UBFD1O14562 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBFD1O14562 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBFD1O14562 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.17■□□□□ 0.5
UBFD1O14562 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.17■□□□□ 0.5
UBFD1O14562 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBFD1O14562 AC128676.1-201ENST00000454392 318 ntBASIC18.17■□□□□ 0.5
UBFD1O14562 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.17■□□□□ 0.5
UBFD1O14562 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.17■□□□□ 0.5
UBFD1O14562 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBFD1O14562 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBFD1O14562 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBFD1O14562 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBFD1O14562 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBFD1O14562 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.17■□□□□ 0.5
UBFD1O14562 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBFD1O14562 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
UBFD1O14562 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBFD1O14562 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.17■□□□□ 0.5
UBFD1O14562 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.17■□□□□ 0.5
UBFD1O14562 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBFD1O14562 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBFD1O14562 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
UBFD1O14562 RCC2P3-201ENST00000418112 1537 ntBASIC18.17■□□□□ 0.5
UBFD1O14562 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
UBFD1O14562 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
UBFD1O14562 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBFD1O14562 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.17■□□□□ 0.5
UBFD1O14562 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBFD1O14562 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.17■□□□□ 0.5
UBFD1O14562 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBFD1O14562 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.16■□□□□ 0.5
UBFD1O14562 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
UBFD1O14562 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.16■□□□□ 0.5
UBFD1O14562 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.16■□□□□ 0.5
UBFD1O14562 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBFD1O14562 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBFD1O14562 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.16■□□□□ 0.5
UBFD1O14562 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.16■□□□□ 0.5
UBFD1O14562 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
UBFD1O14562 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.16■□□□□ 0.5
UBFD1O14562 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBFD1O14562 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBFD1O14562 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.16■□□□□ 0.5
UBFD1O14562 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.16■□□□□ 0.5
UBFD1O14562 CKBP1-201ENST00000565489 1086 ntBASIC18.16■□□□□ 0.5
UBFD1O14562 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.16■□□□□ 0.5
UBFD1O14562 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.16■□□□□ 0.5
UBFD1O14562 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBFD1O14562 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.16■□□□□ 0.5
UBFD1O14562 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBFD1O14562 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.16■□□□□ 0.5
UBFD1O14562 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.16■□□□□ 0.5
UBFD1O14562 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.16■□□□□ 0.5
UBFD1O14562 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBFD1O14562 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.16■□□□□ 0.5
UBFD1O14562 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.16■□□□□ 0.5
UBFD1O14562 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBFD1O14562 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBFD1O14562 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBFD1O14562 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
UBFD1O14562 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBFD1O14562 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.16■□□□□ 0.5
UBFD1O14562 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBFD1O14562 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBFD1O14562 KRT16P1-201ENST00000399124 1418 ntBASIC18.15■□□□□ 0.5
UBFD1O14562 AC112777.1-201ENST00000540175 1423 ntBASIC18.15■□□□□ 0.5
UBFD1O14562 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.15■□□□□ 0.5
UBFD1O14562 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.15■□□□□ 0.5
UBFD1O14562 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms