Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM1O00151 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PDLIM1O00151 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM1O00151 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.81■□□□□ 0.44
PDLIM1O00151 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.81■□□□□ 0.44
PDLIM1O00151 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.81■□□□□ 0.44
PDLIM1O00151 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.81■□□□□ 0.44
PDLIM1O00151 AL596257.1-201ENST00000641463 2694 ntBASIC17.81■□□□□ 0.44
PDLIM1O00151 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM1O00151 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
PDLIM1O00151 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.81■□□□□ 0.44
PDLIM1O00151 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
PDLIM1O00151 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM1O00151 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM1O00151 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM1O00151 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.81■□□□□ 0.44
PDLIM1O00151 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.81■□□□□ 0.44
PDLIM1O00151 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM1O00151 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PDLIM1O00151 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM1O00151 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM1O00151 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM1O00151 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM1O00151 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.81■□□□□ 0.44
PDLIM1O00151 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PDLIM1O00151 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM1O00151 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM1O00151 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM1O00151 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PDLIM1O00151 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.81■□□□□ 0.44
PDLIM1O00151 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM1O00151 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM1O00151 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM1O00151 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM1O00151 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PDLIM1O00151 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PDLIM1O00151 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM1O00151 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
PDLIM1O00151 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM1O00151 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM1O00151 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
PDLIM1O00151 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM1O00151 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.8■□□□□ 0.44
PDLIM1O00151 AC008764.6-201ENST00000595909 2069 ntBASIC17.8■□□□□ 0.44
PDLIM1O00151 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.8■□□□□ 0.44
PDLIM1O00151 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM1O00151 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM1O00151 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PDLIM1O00151 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.8■□□□□ 0.44
PDLIM1O00151 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.8■□□□□ 0.44
PDLIM1O00151 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM1O00151 AC104417.2-201ENST00000562989 1793 ntBASIC17.8■□□□□ 0.44
PDLIM1O00151 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.8■□□□□ 0.44
PDLIM1O00151 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PDLIM1O00151 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PDLIM1O00151 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.8■□□□□ 0.44
PDLIM1O00151 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM1O00151 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM1O00151 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM1O00151 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.8■□□□□ 0.44
PDLIM1O00151 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM1O00151 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM1O00151 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
PDLIM1O00151 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.79■□□□□ 0.44
PDLIM1O00151 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.79■□□□□ 0.44
PDLIM1O00151 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM1O00151 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM1O00151 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.79■□□□□ 0.44
PDLIM1O00151 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM1O00151 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.79■□□□□ 0.44
PDLIM1O00151 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.79■□□□□ 0.44
PDLIM1O00151 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PDLIM1O00151 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
PDLIM1O00151 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM1O00151 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM1O00151 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM1O00151 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PDLIM1O00151 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM1O00151 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM1O00151 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM1O00151 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.79■□□□□ 0.44
PDLIM1O00151 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM1O00151 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
PDLIM1O00151 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.79■□□□□ 0.44
PDLIM1O00151 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.79■□□□□ 0.44
PDLIM1O00151 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.79■□□□□ 0.44
PDLIM1O00151 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.79■□□□□ 0.44
PDLIM1O00151 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM1O00151 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.79■□□□□ 0.44
PDLIM1O00151 AC060766.5-201ENST00000590539 871 ntBASIC17.79■□□□□ 0.44
PDLIM1O00151 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.79■□□□□ 0.44
PDLIM1O00151 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
PDLIM1O00151 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM1O00151 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.79■□□□□ 0.44
PDLIM1O00151 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.79■□□□□ 0.44
PDLIM1O00151 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.79■□□□□ 0.44
PDLIM1O00151 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM1O00151 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM1O00151 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM1O00151 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms