Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 AC093827.2-201ENST00000512654 315 ntBASIC18.73■□□□□ 0.59
CCDC162PA2VCL2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
CCDC162PA2VCL2 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC162PA2VCL2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC162PA2VCL2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC162PA2VCL2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC162PA2VCL2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC162PA2VCL2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC162PA2VCL2 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.72■□□□□ 0.59
CCDC162PA2VCL2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC162PA2VCL2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC162PA2VCL2 AC104581.1-202ENST00000635932 2618 ntBASIC18.72■□□□□ 0.59
CCDC162PA2VCL2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC162PA2VCL2 AL357033.4-201ENST00000617703 1807 ntBASIC18.72■□□□□ 0.59
CCDC162PA2VCL2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC162PA2VCL2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC162PA2VCL2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC162PA2VCL2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC162PA2VCL2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CCDC162PA2VCL2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.72■□□□□ 0.59
CCDC162PA2VCL2 MIR1238-201ENST00000408483 83 ntBASIC18.72■□□□□ 0.59
CCDC162PA2VCL2 CA15P1-201ENST00000481698 905 ntBASIC18.72■□□□□ 0.59
CCDC162PA2VCL2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC162PA2VCL2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.72■□□□□ 0.59
CCDC162PA2VCL2 FITM1-202ENST00000559294 800 ntBASIC18.72■□□□□ 0.59
CCDC162PA2VCL2 AC066615.1-201ENST00000640911 628 ntBASIC18.72■□□□□ 0.59
CCDC162PA2VCL2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC162PA2VCL2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC162PA2VCL2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC162PA2VCL2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC162PA2VCL2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC162PA2VCL2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC162PA2VCL2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CCDC162PA2VCL2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC162PA2VCL2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC162PA2VCL2 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC162PA2VCL2 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC162PA2VCL2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC162PA2VCL2 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC162PA2VCL2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC162PA2VCL2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC162PA2VCL2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
CCDC162PA2VCL2 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC162PA2VCL2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC162PA2VCL2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC162PA2VCL2 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CCDC162PA2VCL2 GPAT2P1-201ENST00000444924 1672 ntBASIC18.71■□□□□ 0.59
CCDC162PA2VCL2 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CCDC162PA2VCL2 AL023284.2-201ENST00000405850 579 ntBASIC18.71■□□□□ 0.59
CCDC162PA2VCL2 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC162PA2VCL2 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC162PA2VCL2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC162PA2VCL2 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC162PA2VCL2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC162PA2VCL2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC162PA2VCL2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC162PA2VCL2 AC005082.1-201ENST00000413042 2259 ntBASIC18.71■□□□□ 0.59
CCDC162PA2VCL2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC162PA2VCL2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC162PA2VCL2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC162PA2VCL2 AL499627.1-201ENST00000569373 2188 ntBASIC18.71■□□□□ 0.59
CCDC162PA2VCL2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC162PA2VCL2 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC162PA2VCL2 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CCDC162PA2VCL2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 AL596275.1-201ENST00000423464 877 ntBASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 AC008556.1-201ENST00000610908 2040 ntBASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC162PA2VCL2 AL109659.2-201ENST00000606809 1674 ntBASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms