Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 WWOX-216ENST00000569818 525 ntBASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 AC145285.6-201ENST00000604632 637 ntBASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
CCDC196A0A1B0GTZ2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC196A0A1B0GTZ2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC196A0A1B0GTZ2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC196A0A1B0GTZ2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC196A0A1B0GTZ2 INGX-201ENST00000359239 846 ntBASIC21.75■■□□□ 1.07
CCDC196A0A1B0GTZ2 HMGA1P5-201ENST00000412453 271 ntBASIC21.75■■□□□ 1.07
CCDC196A0A1B0GTZ2 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC196A0A1B0GTZ2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.75■■□□□ 1.07
CCDC196A0A1B0GTZ2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC196A0A1B0GTZ2 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC196A0A1B0GTZ2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC196A0A1B0GTZ2 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC196A0A1B0GTZ2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC196A0A1B0GTZ2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
CCDC196A0A1B0GTZ2 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC196A0A1B0GTZ2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CCDC196A0A1B0GTZ2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC196A0A1B0GTZ2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC196A0A1B0GTZ2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC196A0A1B0GTZ2 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC196A0A1B0GTZ2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC196A0A1B0GTZ2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC196A0A1B0GTZ2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC196A0A1B0GTZ2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC196A0A1B0GTZ2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
CCDC196A0A1B0GTZ2 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC196A0A1B0GTZ2 AC112777.1-201ENST00000540175 1423 ntBASIC21.74■■□□□ 1.07
CCDC196A0A1B0GTZ2 AC034236.2-201ENST00000606662 1610 ntBASIC21.74■■□□□ 1.07
CCDC196A0A1B0GTZ2 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC196A0A1B0GTZ2 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CCDC196A0A1B0GTZ2 ECEL1P2-202ENST00000465689 757 ntBASIC21.74■■□□□ 1.07
CCDC196A0A1B0GTZ2 KRT18P41-201ENST00000518924 1277 ntBASIC21.74■■□□□ 1.07
CCDC196A0A1B0GTZ2 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC196A0A1B0GTZ2 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC196A0A1B0GTZ2 FAM87A-204ENST00000613235 858 ntBASIC21.74■■□□□ 1.07
CCDC196A0A1B0GTZ2 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CCDC196A0A1B0GTZ2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC196A0A1B0GTZ2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC196A0A1B0GTZ2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
CCDC196A0A1B0GTZ2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CCDC196A0A1B0GTZ2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC196A0A1B0GTZ2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC196A0A1B0GTZ2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC196A0A1B0GTZ2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC196A0A1B0GTZ2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CCDC196A0A1B0GTZ2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC196A0A1B0GTZ2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC196A0A1B0GTZ2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC196A0A1B0GTZ2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC196A0A1B0GTZ2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC196A0A1B0GTZ2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC196A0A1B0GTZ2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC196A0A1B0GTZ2 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC196A0A1B0GTZ2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC196A0A1B0GTZ2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC196A0A1B0GTZ2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC196A0A1B0GTZ2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC196A0A1B0GTZ2 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
CCDC196A0A1B0GTZ2 CR769767.2-201ENST00000622735 460 ntBASIC21.73■■□□□ 1.07
CCDC196A0A1B0GTZ2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC196A0A1B0GTZ2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC196A0A1B0GTZ2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC196A0A1B0GTZ2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CCDC196A0A1B0GTZ2 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC196A0A1B0GTZ2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC196A0A1B0GTZ2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CCDC196A0A1B0GTZ2 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC196A0A1B0GTZ2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC196A0A1B0GTZ2 KRT8P45-201ENST00000414328 1447 ntBASIC21.72■■□□□ 1.07
CCDC196A0A1B0GTZ2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC196A0A1B0GTZ2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CCDC196A0A1B0GTZ2 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC196A0A1B0GTZ2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC196A0A1B0GTZ2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC196A0A1B0GTZ2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC196A0A1B0GTZ2 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC196A0A1B0GTZ2 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC196A0A1B0GTZ2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC196A0A1B0GTZ2 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC196A0A1B0GTZ2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC196A0A1B0GTZ2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC196A0A1B0GTZ2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.72■■□□□ 1.07
CCDC196A0A1B0GTZ2 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC196A0A1B0GTZ2 AC036111.1-201ENST00000533973 1582 ntBASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms