Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RNF103-CHMP3A0A140T963 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RNF103-CHMP3A0A140T963 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF103-CHMP3A0A140T963 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF103-CHMP3A0A140T963 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF103-CHMP3A0A140T963 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
RNF103-CHMP3A0A140T963 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF103-CHMP3A0A140T963 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF103-CHMP3A0A140T963 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF103-CHMP3A0A140T963 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
RNF103-CHMP3A0A140T963 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RNF103-CHMP3A0A140T963 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF103-CHMP3A0A140T963 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF103-CHMP3A0A140T963 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.05■□□□□ 0.48
RNF103-CHMP3A0A140T963 RNA5SP413-201ENST00000516373 109 ntBASIC18.05■□□□□ 0.48
RNF103-CHMP3A0A140T963 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.05■□□□□ 0.48
RNF103-CHMP3A0A140T963 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF103-CHMP3A0A140T963 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF103-CHMP3A0A140T963 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF103-CHMP3A0A140T963 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF103-CHMP3A0A140T963 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.05■□□□□ 0.48
RNF103-CHMP3A0A140T963 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF103-CHMP3A0A140T963 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF103-CHMP3A0A140T963 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF103-CHMP3A0A140T963 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RNF103-CHMP3A0A140T963 IRX1P1-201ENST00000438849 1838 ntBASIC18.05■□□□□ 0.48
RNF103-CHMP3A0A140T963 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 AP003097.1-201ENST00000530657 1135 ntBASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 AC008403.3-201ENST00000598924 454 ntBASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF103-CHMP3A0A140T963 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 NBPF21P-201ENST00000425093 1451 ntBASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 AL512353.2-201ENST00000448759 1962 ntBASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF103-CHMP3A0A140T963 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms