Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 AC091390.4-202ENST00000476426 537 ntBASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 MIR6786-201ENST00000616843 113 ntBASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 AP006294.2-201ENST00000641667 209 ntBASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 AL049637.2-201ENST00000641778 930 ntBASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DRB4X5D2U9 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 AP000997.3-201ENST00000623333 2250 ntBASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 B3GAT3P1-201ENST00000471720 806 ntBASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 AC008550.1-201ENST00000511500 884 ntBASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 AC113410.3-201ENST00000623366 203 ntBASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 KRT8P11-201ENST00000409686 1436 ntBASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 AL390961.4-201ENST00000623958 2535 ntBASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DRB4X5D2U9 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms