Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB1Q9Y5F3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB1Q9Y5F3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB1Q9Y5F3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHB1Q9Y5F3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB1Q9Y5F3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHB1Q9Y5F3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PCDHB1Q9Y5F3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB1Q9Y5F3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHB1Q9Y5F3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB1Q9Y5F3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHB1Q9Y5F3 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.75■□□□□ 0.59
PCDHB1Q9Y5F3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHB1Q9Y5F3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PCDHB1Q9Y5F3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB1Q9Y5F3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 AC004408.2-201ENST00000623613 2777 ntBASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 AL031133.1-201ENST00000406807 723 ntBASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 FAM8A6P-201ENST00000407496 1135 ntBASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 AL121894.2-201ENST00000602977 491 ntBASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 KRT8P3-201ENST00000519669 1449 ntBASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB1Q9Y5F3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB1Q9Y5F3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB1Q9Y5F3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB1Q9Y5F3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB1Q9Y5F3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB1Q9Y5F3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHB1Q9Y5F3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB1Q9Y5F3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHB1Q9Y5F3 RNF152P1-201ENST00000397754 604 ntBASIC18.73■□□□□ 0.59
PCDHB1Q9Y5F3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PCDHB1Q9Y5F3 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.73■□□□□ 0.59
PCDHB1Q9Y5F3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHB1Q9Y5F3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHB1Q9Y5F3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
PCDHB1Q9Y5F3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
PCDHB1Q9Y5F3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHB1Q9Y5F3 AL138966.2-201ENST00000621997 464 ntBASIC18.73■□□□□ 0.59
PCDHB1Q9Y5F3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB1Q9Y5F3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB1Q9Y5F3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB1Q9Y5F3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHB1Q9Y5F3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB1Q9Y5F3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHB1Q9Y5F3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB1Q9Y5F3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
PCDHB1Q9Y5F3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHB1Q9Y5F3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB1Q9Y5F3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB1Q9Y5F3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB1Q9Y5F3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.72■□□□□ 0.59
PCDHB1Q9Y5F3 MFAP1P1-201ENST00000442257 1255 ntBASIC18.72■□□□□ 0.59
PCDHB1Q9Y5F3 YBX1P2-201ENST00000489612 999 ntBASIC18.72■□□□□ 0.59
PCDHB1Q9Y5F3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB1Q9Y5F3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.72■□□□□ 0.59
PCDHB1Q9Y5F3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDHB1Q9Y5F3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB1Q9Y5F3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
PCDHB1Q9Y5F3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHB1Q9Y5F3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHB1Q9Y5F3 AC116562.4-202ENST00000641738 218 ntBASIC18.72■□□□□ 0.59
PCDHB1Q9Y5F3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHB1Q9Y5F3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB1Q9Y5F3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PCDHB1Q9Y5F3 Z98044.1-201ENST00000632503 1764 ntBASIC18.72■□□□□ 0.59
PCDHB1Q9Y5F3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCDHB1Q9Y5F3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHB1Q9Y5F3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB1Q9Y5F3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHB1Q9Y5F3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms