Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPH3AQ9Y2J0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPH3AQ9Y2J0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPH3AQ9Y2J0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPH3AQ9Y2J0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
RPH3AQ9Y2J0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RPH3AQ9Y2J0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.18■□□□□ 0.34
RPH3AQ9Y2J0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RPH3AQ9Y2J0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RPH3AQ9Y2J0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPH3AQ9Y2J0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPH3AQ9Y2J0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPH3AQ9Y2J0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RPH3AQ9Y2J0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.18■□□□□ 0.34
RPH3AQ9Y2J0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPH3AQ9Y2J0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPH3AQ9Y2J0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RPH3AQ9Y2J0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 FEM1AP3-201ENST00000403722 1741 ntBASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 AC007663.1-201ENST00000438948 1240 ntBASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 SLC25A3P1-201ENST00000443844 931 ntBASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 TSPY17P-201ENST00000450329 467 ntBASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 CA15P1-201ENST00000481698 905 ntBASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 AL023803.3-201ENST00000615559 522 ntBASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPH3AQ9Y2J0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.16■□□□□ 0.34
RPH3AQ9Y2J0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RPH3AQ9Y2J0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
RPH3AQ9Y2J0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPH3AQ9Y2J0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPH3AQ9Y2J0 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPH3AQ9Y2J0 AC092338.2-201ENST00000568827 1415 ntBASIC17.16■□□□□ 0.34
RPH3AQ9Y2J0 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPH3AQ9Y2J0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RPH3AQ9Y2J0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
RPH3AQ9Y2J0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.16■□□□□ 0.34
RPH3AQ9Y2J0 AP003041.3-201ENST00000527151 707 ntBASIC17.16■□□□□ 0.34
RPH3AQ9Y2J0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RPH3AQ9Y2J0 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.16■□□□□ 0.34
RPH3AQ9Y2J0 AL353719.1-201ENST00000566847 864 ntBASIC17.16■□□□□ 0.34
RPH3AQ9Y2J0 FAM87A-204ENST00000613235 858 ntBASIC17.16■□□□□ 0.34
RPH3AQ9Y2J0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.16■□□□□ 0.34
RPH3AQ9Y2J0 FP475955.4-201ENST00000623131 1990 ntBASIC17.16■□□□□ 0.34
RPH3AQ9Y2J0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPH3AQ9Y2J0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RPH3AQ9Y2J0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPH3AQ9Y2J0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPH3AQ9Y2J0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.16■□□□□ 0.34
RPH3AQ9Y2J0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.16■□□□□ 0.34
RPH3AQ9Y2J0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPH3AQ9Y2J0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.16■□□□□ 0.34
RPH3AQ9Y2J0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPH3AQ9Y2J0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RPH3AQ9Y2J0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RPH3AQ9Y2J0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RPH3AQ9Y2J0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPH3AQ9Y2J0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPH3AQ9Y2J0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPH3AQ9Y2J0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RPH3AQ9Y2J0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.15■□□□□ 0.34
RPH3AQ9Y2J0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPH3AQ9Y2J0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPH3AQ9Y2J0 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RPH3AQ9Y2J0 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
RPH3AQ9Y2J0 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RPH3AQ9Y2J0 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPH3AQ9Y2J0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RPH3AQ9Y2J0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPH3AQ9Y2J0 AC005521.1-201ENST00000393351 872 ntBASIC17.15■□□□□ 0.34
RPH3AQ9Y2J0 LIN28AP1-201ENST00000429574 405 ntBASIC17.15■□□□□ 0.34
RPH3AQ9Y2J0 AL137013.1-201ENST00000432946 1228 ntBASIC17.15■□□□□ 0.34
RPH3AQ9Y2J0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.15■□□□□ 0.34
RPH3AQ9Y2J0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.15■□□□□ 0.34
RPH3AQ9Y2J0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.15■□□□□ 0.34
RPH3AQ9Y2J0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
RPH3AQ9Y2J0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.15■□□□□ 0.34
RPH3AQ9Y2J0 AL049812.1-201ENST00000432563 2267 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms