Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RABGEF1Q9UJ41 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.26■□□□□ 0.67
RABGEF1Q9UJ41 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RABGEF1Q9UJ41 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RABGEF1Q9UJ41 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RABGEF1Q9UJ41 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
RABGEF1Q9UJ41 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RABGEF1Q9UJ41 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
RABGEF1Q9UJ41 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
RABGEF1Q9UJ41 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.25■□□□□ 0.67
RABGEF1Q9UJ41 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RABGEF1Q9UJ41 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RABGEF1Q9UJ41 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RABGEF1Q9UJ41 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.25■□□□□ 0.67
RABGEF1Q9UJ41 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RABGEF1Q9UJ41 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.25■□□□□ 0.67
RABGEF1Q9UJ41 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RABGEF1Q9UJ41 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RABGEF1Q9UJ41 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.25■□□□□ 0.67
RABGEF1Q9UJ41 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.25■□□□□ 0.67
RABGEF1Q9UJ41 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
RABGEF1Q9UJ41 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
RABGEF1Q9UJ41 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RABGEF1Q9UJ41 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RABGEF1Q9UJ41 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.25■□□□□ 0.67
RABGEF1Q9UJ41 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.25■□□□□ 0.67
RABGEF1Q9UJ41 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RABGEF1Q9UJ41 AC004264.1-201ENST00000608354 794 ntBASIC19.25■□□□□ 0.67
RABGEF1Q9UJ41 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RABGEF1Q9UJ41 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RABGEF1Q9UJ41 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RABGEF1Q9UJ41 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RABGEF1Q9UJ41 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RABGEF1Q9UJ41 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.24■□□□□ 0.67
RABGEF1Q9UJ41 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.24■□□□□ 0.67
RABGEF1Q9UJ41 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RABGEF1Q9UJ41 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RABGEF1Q9UJ41 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
RABGEF1Q9UJ41 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RABGEF1Q9UJ41 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.24■□□□□ 0.67
RABGEF1Q9UJ41 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RABGEF1Q9UJ41 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RABGEF1Q9UJ41 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RABGEF1Q9UJ41 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.24■□□□□ 0.67
RABGEF1Q9UJ41 RCN1P1-201ENST00000400413 996 ntBASIC19.24■□□□□ 0.67
RABGEF1Q9UJ41 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.24■□□□□ 0.67
RABGEF1Q9UJ41 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.24■□□□□ 0.67
RABGEF1Q9UJ41 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.24■□□□□ 0.67
RABGEF1Q9UJ41 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RABGEF1Q9UJ41 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RABGEF1Q9UJ41 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RABGEF1Q9UJ41 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RABGEF1Q9UJ41 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RABGEF1Q9UJ41 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RABGEF1Q9UJ41 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RABGEF1Q9UJ41 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.24■□□□□ 0.67
RABGEF1Q9UJ41 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RABGEF1Q9UJ41 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RABGEF1Q9UJ41 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.24■□□□□ 0.67
RABGEF1Q9UJ41 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RABGEF1Q9UJ41 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RABGEF1Q9UJ41 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RABGEF1Q9UJ41 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RABGEF1Q9UJ41 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RABGEF1Q9UJ41 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RABGEF1Q9UJ41 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RABGEF1Q9UJ41 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RABGEF1Q9UJ41 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RABGEF1Q9UJ41 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RABGEF1Q9UJ41 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.23■□□□□ 0.67
RABGEF1Q9UJ41 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.23■□□□□ 0.67
RABGEF1Q9UJ41 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.23■□□□□ 0.67
RABGEF1Q9UJ41 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.23■□□□□ 0.67
RABGEF1Q9UJ41 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RABGEF1Q9UJ41 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.23■□□□□ 0.67
RABGEF1Q9UJ41 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
RABGEF1Q9UJ41 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RABGEF1Q9UJ41 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RABGEF1Q9UJ41 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RABGEF1Q9UJ41 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.23■□□□□ 0.67
RABGEF1Q9UJ41 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
RABGEF1Q9UJ41 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
RABGEF1Q9UJ41 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RABGEF1Q9UJ41 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RABGEF1Q9UJ41 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.22■□□□□ 0.67
RABGEF1Q9UJ41 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.22■□□□□ 0.67
RABGEF1Q9UJ41 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.22■□□□□ 0.67
RABGEF1Q9UJ41 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RABGEF1Q9UJ41 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RABGEF1Q9UJ41 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RABGEF1Q9UJ41 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RABGEF1Q9UJ41 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RABGEF1Q9UJ41 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.22■□□□□ 0.67
RABGEF1Q9UJ41 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RABGEF1Q9UJ41 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RABGEF1Q9UJ41 MMP23A-201ENST00000234610 1017 ntBASIC19.22■□□□□ 0.67
RABGEF1Q9UJ41 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RABGEF1Q9UJ41 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RABGEF1Q9UJ41 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RABGEF1Q9UJ41 AP002982.1-201ENST00000492365 877 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms