Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.62■□□□□ 0.89
GTF2IRD1Q9UHL9 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.62■□□□□ 0.89
GTF2IRD1Q9UHL9 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
GTF2IRD1Q9UHL9 AP000867.3-201ENST00000524675 377 ntBASIC20.62■□□□□ 0.89
GTF2IRD1Q9UHL9 AC005332.3-201ENST00000589904 676 ntBASIC20.62■□□□□ 0.89
GTF2IRD1Q9UHL9 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.62■□□□□ 0.89
GTF2IRD1Q9UHL9 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
GTF2IRD1Q9UHL9 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
GTF2IRD1Q9UHL9 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.62■□□□□ 0.89
GTF2IRD1Q9UHL9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GTF2IRD1Q9UHL9 AC034236.2-201ENST00000606662 1610 ntBASIC20.62■□□□□ 0.89
GTF2IRD1Q9UHL9 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
GTF2IRD1Q9UHL9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.62■□□□□ 0.89
GTF2IRD1Q9UHL9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
GTF2IRD1Q9UHL9 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
GTF2IRD1Q9UHL9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GTF2IRD1Q9UHL9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.62■□□□□ 0.89
GTF2IRD1Q9UHL9 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.61■□□□□ 0.89
GTF2IRD1Q9UHL9 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
GTF2IRD1Q9UHL9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
GTF2IRD1Q9UHL9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GTF2IRD1Q9UHL9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GTF2IRD1Q9UHL9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
GTF2IRD1Q9UHL9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GTF2IRD1Q9UHL9 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GTF2IRD1Q9UHL9 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
GTF2IRD1Q9UHL9 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GTF2IRD1Q9UHL9 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GTF2IRD1Q9UHL9 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.61■□□□□ 0.89
GTF2IRD1Q9UHL9 TOB2P1-201ENST00000469761 992 ntBASIC20.61■□□□□ 0.89
GTF2IRD1Q9UHL9 AP003733.1-201ENST00000491725 852 ntBASIC20.61■□□□□ 0.89
GTF2IRD1Q9UHL9 MIR3180-4-201ENST00000582223 153 ntBASIC20.61■□□□□ 0.89
GTF2IRD1Q9UHL9 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.61■□□□□ 0.89
GTF2IRD1Q9UHL9 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.61■□□□□ 0.89
GTF2IRD1Q9UHL9 AL732292.2-201ENST00000609649 430 ntBASIC20.61■□□□□ 0.89
GTF2IRD1Q9UHL9 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.61■□□□□ 0.89
GTF2IRD1Q9UHL9 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.61■□□□□ 0.89
GTF2IRD1Q9UHL9 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GTF2IRD1Q9UHL9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.61■□□□□ 0.89
GTF2IRD1Q9UHL9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.61■□□□□ 0.89
GTF2IRD1Q9UHL9 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
GTF2IRD1Q9UHL9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
GTF2IRD1Q9UHL9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.6■□□□□ 0.89
GTF2IRD1Q9UHL9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
GTF2IRD1Q9UHL9 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GTF2IRD1Q9UHL9 AC006333.2-201ENST00000607957 2099 ntBASIC20.6■□□□□ 0.89
GTF2IRD1Q9UHL9 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
GTF2IRD1Q9UHL9 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.6■□□□□ 0.89
GTF2IRD1Q9UHL9 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
GTF2IRD1Q9UHL9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GTF2IRD1Q9UHL9 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GTF2IRD1Q9UHL9 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.6■□□□□ 0.89
GTF2IRD1Q9UHL9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.6■□□□□ 0.89
GTF2IRD1Q9UHL9 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.6■□□□□ 0.89
GTF2IRD1Q9UHL9 AC012615.1-201ENST00000565797 1299 ntBASIC20.6■□□□□ 0.89
GTF2IRD1Q9UHL9 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.6■□□□□ 0.89
GTF2IRD1Q9UHL9 AL390719.2-201ENST00000606993 987 ntBASIC20.6■□□□□ 0.89
GTF2IRD1Q9UHL9 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.6■□□□□ 0.89
GTF2IRD1Q9UHL9 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.6■□□□□ 0.89
GTF2IRD1Q9UHL9 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GTF2IRD1Q9UHL9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
GTF2IRD1Q9UHL9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.59■□□□□ 0.89
GTF2IRD1Q9UHL9 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GTF2IRD1Q9UHL9 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GTF2IRD1Q9UHL9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
GTF2IRD1Q9UHL9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
GTF2IRD1Q9UHL9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.59■□□□□ 0.89
GTF2IRD1Q9UHL9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GTF2IRD1Q9UHL9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GTF2IRD1Q9UHL9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.59■□□□□ 0.89
GTF2IRD1Q9UHL9 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
GTF2IRD1Q9UHL9 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
GTF2IRD1Q9UHL9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.59■□□□□ 0.89
GTF2IRD1Q9UHL9 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GTF2IRD1Q9UHL9 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GTF2IRD1Q9UHL9 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.59■□□□□ 0.89
GTF2IRD1Q9UHL9 AC090616.6-201ENST00000582640 721 ntBASIC20.59■□□□□ 0.89
GTF2IRD1Q9UHL9 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
GTF2IRD1Q9UHL9 AFG3L1P-217ENST00000557444 2447 ntBASIC20.59■□□□□ 0.89
GTF2IRD1Q9UHL9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.59■□□□□ 0.89
GTF2IRD1Q9UHL9 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.59■□□□□ 0.89
GTF2IRD1Q9UHL9 KRT8P10-201ENST00000450021 1447 ntBASIC20.59■□□□□ 0.89
GTF2IRD1Q9UHL9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GTF2IRD1Q9UHL9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
GTF2IRD1Q9UHL9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GTF2IRD1Q9UHL9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GTF2IRD1Q9UHL9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
GTF2IRD1Q9UHL9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GTF2IRD1Q9UHL9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GTF2IRD1Q9UHL9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.58■□□□□ 0.89
GTF2IRD1Q9UHL9 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GTF2IRD1Q9UHL9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GTF2IRD1Q9UHL9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GTF2IRD1Q9UHL9 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
GTF2IRD1Q9UHL9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.58■□□□□ 0.89
GTF2IRD1Q9UHL9 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GTF2IRD1Q9UHL9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
GTF2IRD1Q9UHL9 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GTF2IRD1Q9UHL9 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.89
GTF2IRD1Q9UHL9 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms