Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.65■□□□□ 0.58
SPASTQ9UBP0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 NEK4P2-201ENST00000580004 1012 ntBASIC18.65■□□□□ 0.58
SPASTQ9UBP0 AC008622.2-201ENST00000617006 1229 ntBASIC18.65■□□□□ 0.58
SPASTQ9UBP0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 AC098818.2-201ENST00000564925 2320 ntBASIC18.65■□□□□ 0.58
SPASTQ9UBP0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
SPASTQ9UBP0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPASTQ9UBP0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPASTQ9UBP0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPASTQ9UBP0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.64■□□□□ 0.57
SPASTQ9UBP0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPASTQ9UBP0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.64■□□□□ 0.57
SPASTQ9UBP0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPASTQ9UBP0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.64■□□□□ 0.57
SPASTQ9UBP0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPASTQ9UBP0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.64■□□□□ 0.57
SPASTQ9UBP0 UPK3BP1-201ENST00000428678 509 ntBASIC18.64■□□□□ 0.57
SPASTQ9UBP0 TSPY23P-201ENST00000440136 739 ntBASIC18.64■□□□□ 0.57
SPASTQ9UBP0 AC009947.2-201ENST00000444014 672 ntBASIC18.64■□□□□ 0.57
SPASTQ9UBP0 AL359075.1-203ENST00000462729 1002 ntBASIC18.64■□□□□ 0.57
SPASTQ9UBP0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.64■□□□□ 0.57
SPASTQ9UBP0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.64■□□□□ 0.57
SPASTQ9UBP0 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPASTQ9UBP0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.64■□□□□ 0.57
SPASTQ9UBP0 AL121956.5-201ENST00000625261 221 ntBASIC18.64■□□□□ 0.57
SPASTQ9UBP0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPASTQ9UBP0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SPASTQ9UBP0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPASTQ9UBP0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SPASTQ9UBP0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.64■□□□□ 0.57
SPASTQ9UBP0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SPASTQ9UBP0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SPASTQ9UBP0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.64■□□□□ 0.57
SPASTQ9UBP0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.64■□□□□ 0.57
SPASTQ9UBP0 AC005332.7-201ENST00000614046 2005 ntBASIC18.64■□□□□ 0.57
SPASTQ9UBP0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SPASTQ9UBP0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPASTQ9UBP0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPASTQ9UBP0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
SPASTQ9UBP0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPASTQ9UBP0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SPASTQ9UBP0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SPASTQ9UBP0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPASTQ9UBP0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms