Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
MRM3Q9HC36 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MRM3Q9HC36 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.77■□□□□ 0.6
MRM3Q9HC36 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.77■□□□□ 0.6
MRM3Q9HC36 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
MRM3Q9HC36 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
MRM3Q9HC36 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MRM3Q9HC36 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.77■□□□□ 0.6
MRM3Q9HC36 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.77■□□□□ 0.6
MRM3Q9HC36 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.77■□□□□ 0.59
MRM3Q9HC36 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
MRM3Q9HC36 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
MRM3Q9HC36 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
MRM3Q9HC36 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.77■□□□□ 0.59
MRM3Q9HC36 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.77■□□□□ 0.59
MRM3Q9HC36 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
MRM3Q9HC36 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.77■□□□□ 0.59
MRM3Q9HC36 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
MRM3Q9HC36 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.77■□□□□ 0.59
MRM3Q9HC36 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
MRM3Q9HC36 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MRM3Q9HC36 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MRM3Q9HC36 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
MRM3Q9HC36 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MRM3Q9HC36 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MRM3Q9HC36 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MRM3Q9HC36 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.76■□□□□ 0.59
MRM3Q9HC36 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.76■□□□□ 0.59
MRM3Q9HC36 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MRM3Q9HC36 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
MRM3Q9HC36 AL023284.2-201ENST00000405850 579 ntBASIC18.76■□□□□ 0.59
MRM3Q9HC36 AL596275.1-201ENST00000423464 877 ntBASIC18.76■□□□□ 0.59
MRM3Q9HC36 AL355355.2-201ENST00000442321 338 ntBASIC18.76■□□□□ 0.59
MRM3Q9HC36 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.76■□□□□ 0.59
MRM3Q9HC36 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.76■□□□□ 0.59
MRM3Q9HC36 AP005242.2-201ENST00000580065 1175 ntBASIC18.76■□□□□ 0.59
MRM3Q9HC36 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.76■□□□□ 0.59
MRM3Q9HC36 Z99916.2-201ENST00000604037 246 ntBASIC18.76■□□□□ 0.59
MRM3Q9HC36 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.76■□□□□ 0.59
MRM3Q9HC36 AC026471.5-201ENST00000615068 467 ntBASIC18.76■□□□□ 0.59
MRM3Q9HC36 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MRM3Q9HC36 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
MRM3Q9HC36 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MRM3Q9HC36 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
MRM3Q9HC36 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MRM3Q9HC36 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.76■□□□□ 0.59
MRM3Q9HC36 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.76■□□□□ 0.59
MRM3Q9HC36 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MRM3Q9HC36 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MRM3Q9HC36 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MRM3Q9HC36 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.76■□□□□ 0.59
MRM3Q9HC36 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MRM3Q9HC36 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MRM3Q9HC36 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MRM3Q9HC36 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MRM3Q9HC36 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
MRM3Q9HC36 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MRM3Q9HC36 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MRM3Q9HC36 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MRM3Q9HC36 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.75■□□□□ 0.59
MRM3Q9HC36 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
MRM3Q9HC36 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MRM3Q9HC36 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MRM3Q9HC36 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.75■□□□□ 0.59
MRM3Q9HC36 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MRM3Q9HC36 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.75■□□□□ 0.59
MRM3Q9HC36 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MRM3Q9HC36 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.75■□□□□ 0.59
MRM3Q9HC36 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.75■□□□□ 0.59
MRM3Q9HC36 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.75■□□□□ 0.59
MRM3Q9HC36 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MRM3Q9HC36 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MRM3Q9HC36 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRM3Q9HC36 AC008556.1-201ENST00000610908 2040 ntBASIC18.74■□□□□ 0.59
MRM3Q9HC36 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRM3Q9HC36 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.74■□□□□ 0.59
MRM3Q9HC36 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRM3Q9HC36 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.74■□□□□ 0.59
MRM3Q9HC36 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRM3Q9HC36 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRM3Q9HC36 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRM3Q9HC36 AL354751.1-201ENST00000412768 1863 ntBASIC18.74■□□□□ 0.59
MRM3Q9HC36 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.74■□□□□ 0.59
MRM3Q9HC36 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MRM3Q9HC36 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
MRM3Q9HC36 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.74■□□□□ 0.59
MRM3Q9HC36 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.74■□□□□ 0.59
MRM3Q9HC36 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.74■□□□□ 0.59
MRM3Q9HC36 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.74■□□□□ 0.59
MRM3Q9HC36 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRM3Q9HC36 MIR564-202ENST00000385049 94 ntBASIC18.74■□□□□ 0.59
MRM3Q9HC36 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MRM3Q9HC36 MCCD1P1-208ENST00000445732 328 ntBASIC18.74■□□□□ 0.59
MRM3Q9HC36 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.74■□□□□ 0.59
MRM3Q9HC36 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MRM3Q9HC36 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.74■□□□□ 0.59
MRM3Q9HC36 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.74■□□□□ 0.59
MRM3Q9HC36 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.74■□□□□ 0.59
MRM3Q9HC36 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.74■□□□□ 0.59
MRM3Q9HC36 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms