Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 PRORSD1P-202ENST00000563365 2154 ntBASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 AL162741.1-201ENST00000565563 1558 ntBASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
SND1-IT1Q9HBX3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 SDHAP1-207ENST00000440850 2000 ntBASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 GXYLT1P2-201ENST00000433312 1230 ntBASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 AC011767.1-201ENST00000617410 1153 ntBASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 AC139713.2-201ENST00000641328 2723 ntBASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms