Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
VCX3BQ9H321 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VCX3BQ9H321 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VCX3BQ9H321 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VCX3BQ9H321 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
VCX3BQ9H321 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VCX3BQ9H321 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.87■□□□□ 0.45
VCX3BQ9H321 AC018695.7-201ENST00000624587 2492 ntBASIC17.87■□□□□ 0.45
VCX3BQ9H321 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
VCX3BQ9H321 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.87■□□□□ 0.45
VCX3BQ9H321 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.87■□□□□ 0.45
VCX3BQ9H321 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VCX3BQ9H321 TPRG1LP1-201ENST00000598702 760 ntBASIC17.87■□□□□ 0.45
VCX3BQ9H321 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
VCX3BQ9H321 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.87■□□□□ 0.45
VCX3BQ9H321 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VCX3BQ9H321 AL645608.8-201ENST00000606034 2086 ntBASIC17.87■□□□□ 0.45
VCX3BQ9H321 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VCX3BQ9H321 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VCX3BQ9H321 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.87■□□□□ 0.45
VCX3BQ9H321 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VCX3BQ9H321 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.87■□□□□ 0.45
VCX3BQ9H321 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VCX3BQ9H321 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VCX3BQ9H321 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VCX3BQ9H321 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
VCX3BQ9H321 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.86■□□□□ 0.45
VCX3BQ9H321 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VCX3BQ9H321 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
VCX3BQ9H321 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
VCX3BQ9H321 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VCX3BQ9H321 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
VCX3BQ9H321 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VCX3BQ9H321 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
VCX3BQ9H321 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.86■□□□□ 0.45
VCX3BQ9H321 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
VCX3BQ9H321 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VCX3BQ9H321 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
VCX3BQ9H321 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
VCX3BQ9H321 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
VCX3BQ9H321 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.86■□□□□ 0.45
VCX3BQ9H321 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.86■□□□□ 0.45
VCX3BQ9H321 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.86■□□□□ 0.45
VCX3BQ9H321 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
VCX3BQ9H321 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.86■□□□□ 0.45
VCX3BQ9H321 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VCX3BQ9H321 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
VCX3BQ9H321 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VCX3BQ9H321 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
VCX3BQ9H321 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
VCX3BQ9H321 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
VCX3BQ9H321 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VCX3BQ9H321 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VCX3BQ9H321 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VCX3BQ9H321 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VCX3BQ9H321 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
VCX3BQ9H321 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VCX3BQ9H321 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VCX3BQ9H321 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
VCX3BQ9H321 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VCX3BQ9H321 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.85■□□□□ 0.45
VCX3BQ9H321 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
VCX3BQ9H321 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VCX3BQ9H321 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VCX3BQ9H321 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
VCX3BQ9H321 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.85■□□□□ 0.45
VCX3BQ9H321 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.85■□□□□ 0.45
VCX3BQ9H321 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VCX3BQ9H321 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
VCX3BQ9H321 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.85■□□□□ 0.45
VCX3BQ9H321 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VCX3BQ9H321 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VCX3BQ9H321 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VCX3BQ9H321 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.85■□□□□ 0.45
VCX3BQ9H321 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.85■□□□□ 0.45
VCX3BQ9H321 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VCX3BQ9H321 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VCX3BQ9H321 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VCX3BQ9H321 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.85■□□□□ 0.45
VCX3BQ9H321 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
VCX3BQ9H321 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.85■□□□□ 0.45
VCX3BQ9H321 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VCX3BQ9H321 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.85■□□□□ 0.45
VCX3BQ9H321 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VCX3BQ9H321 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
VCX3BQ9H321 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VCX3BQ9H321 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.84■□□□□ 0.45
VCX3BQ9H321 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
VCX3BQ9H321 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
VCX3BQ9H321 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VCX3BQ9H321 AC138028.4-201ENST00000564984 1845 ntBASIC17.84■□□□□ 0.45
VCX3BQ9H321 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VCX3BQ9H321 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VCX3BQ9H321 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
VCX3BQ9H321 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VCX3BQ9H321 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VCX3BQ9H321 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.84■□□□□ 0.45
VCX3BQ9H321 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.84■□□□□ 0.45
VCX3BQ9H321 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.84■□□□□ 0.45
VCX3BQ9H321 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms