Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 AC091390.4-202ENST00000476426 537 ntBASIC21.78■■□□□ 1.08
SDF4Q9BRK5 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC21.77■■□□□ 1.08
SDF4Q9BRK5 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SDF4Q9BRK5 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SDF4Q9BRK5 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SDF4Q9BRK5 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SDF4Q9BRK5 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SDF4Q9BRK5 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SDF4Q9BRK5 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SDF4Q9BRK5 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SDF4Q9BRK5 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.77■■□□□ 1.08
SDF4Q9BRK5 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.77■■□□□ 1.08
SDF4Q9BRK5 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SDF4Q9BRK5 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.77■■□□□ 1.08
SDF4Q9BRK5 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.77■■□□□ 1.08
SDF4Q9BRK5 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.77■■□□□ 1.08
SDF4Q9BRK5 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.77■■□□□ 1.08
SDF4Q9BRK5 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.77■■□□□ 1.08
SDF4Q9BRK5 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.77■■□□□ 1.08
SDF4Q9BRK5 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SDF4Q9BRK5 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SDF4Q9BRK5 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SDF4Q9BRK5 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
SDF4Q9BRK5 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SDF4Q9BRK5 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.77■■□□□ 1.07
SDF4Q9BRK5 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
SDF4Q9BRK5 CYP2D8P-201ENST00000433633 1490 ntBASIC21.77■■□□□ 1.07
SDF4Q9BRK5 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SDF4Q9BRK5 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SDF4Q9BRK5 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
SDF4Q9BRK5 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SDF4Q9BRK5 LINC01568-207ENST00000641790 1380 ntBASIC21.76■■□□□ 1.07
SDF4Q9BRK5 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SDF4Q9BRK5 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SDF4Q9BRK5 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SDF4Q9BRK5 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SDF4Q9BRK5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.76■■□□□ 1.07
SDF4Q9BRK5 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SDF4Q9BRK5 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
SDF4Q9BRK5 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SDF4Q9BRK5 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SDF4Q9BRK5 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SDF4Q9BRK5 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SDF4Q9BRK5 C2orf69P3-201ENST00000565542 1120 ntBASIC21.76■■□□□ 1.07
SDF4Q9BRK5 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.76■■□□□ 1.07
SDF4Q9BRK5 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
SDF4Q9BRK5 AC145285.6-201ENST00000604632 637 ntBASIC21.76■■□□□ 1.07
SDF4Q9BRK5 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.76■■□□□ 1.07
SDF4Q9BRK5 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SDF4Q9BRK5 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SDF4Q9BRK5 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.76■■□□□ 1.07
SDF4Q9BRK5 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.76■■□□□ 1.07
SDF4Q9BRK5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SDF4Q9BRK5 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SDF4Q9BRK5 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
SDF4Q9BRK5 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SDF4Q9BRK5 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SDF4Q9BRK5 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SDF4Q9BRK5 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SDF4Q9BRK5 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.75■■□□□ 1.07
SDF4Q9BRK5 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.75■■□□□ 1.07
SDF4Q9BRK5 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SDF4Q9BRK5 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SDF4Q9BRK5 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.75■■□□□ 1.07
SDF4Q9BRK5 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SDF4Q9BRK5 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SDF4Q9BRK5 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.75■■□□□ 1.07
SDF4Q9BRK5 AC010947.1-201ENST00000623454 693 ntBASIC21.75■■□□□ 1.07
SDF4Q9BRK5 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms