Protein–RNA interactions for Protein: Q96QR1

SCGB3A1, Secretoglobin family 3A member 1, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB3A1Q96QR1 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SCGB3A1Q96QR1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
SCGB3A1Q96QR1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC13.42□□□□□ -0.26
SCGB3A1Q96QR1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SCGB3A1Q96QR1 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
SCGB3A1Q96QR1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC13.42□□□□□ -0.26
SCGB3A1Q96QR1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC13.42□□□□□ -0.26
SCGB3A1Q96QR1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
SCGB3A1Q96QR1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC13.42□□□□□ -0.26
SCGB3A1Q96QR1 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SCGB3A1Q96QR1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SCGB3A1Q96QR1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SCGB3A1Q96QR1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
SCGB3A1Q96QR1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SCGB3A1Q96QR1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SCGB3A1Q96QR1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SCGB3A1Q96QR1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SCGB3A1Q96QR1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC13.42□□□□□ -0.26
SCGB3A1Q96QR1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
SCGB3A1Q96QR1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
SCGB3A1Q96QR1 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SCGB3A1Q96QR1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SCGB3A1Q96QR1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 ANKRD18DP-204ENST00000455355 1975 ntBASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 AC009053.2-201ENST00000563701 2365 ntBASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 AC096631.2-201ENST00000436136 790 ntBASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 YBX1P1-201ENST00000445822 960 ntBASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 AC099398.1-201ENST00000567919 2776 ntBASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SCGB3A1Q96QR1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 KRT18P68-201ENST00000392293 1000 ntBASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 AL162412.1-201ENST00000567129 965 ntBASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 AC100791.3-201ENST00000617619 330 ntBASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 AL136967.2-201ENST00000623968 743 ntBASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SCGB3A1Q96QR1 FLJ16779-201ENST00000612722 7638 ntBASIC13.4□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms