Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NECTIN4Q96NY8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NECTIN4Q96NY8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NECTIN4Q96NY8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NECTIN4Q96NY8 NSUN5P1-202ENST00000421140 1535 ntBASIC19.41■□□□□ 0.7
NECTIN4Q96NY8 NSUN5P2-203ENST00000457352 1529 ntBASIC19.41■□□□□ 0.7
NECTIN4Q96NY8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NECTIN4Q96NY8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NECTIN4Q96NY8 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NECTIN4Q96NY8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NECTIN4Q96NY8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NECTIN4Q96NY8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NECTIN4Q96NY8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NECTIN4Q96NY8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NECTIN4Q96NY8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
NECTIN4Q96NY8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NECTIN4Q96NY8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NECTIN4Q96NY8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NECTIN4Q96NY8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.4■□□□□ 0.7
NECTIN4Q96NY8 RN7SL606P-201ENST00000472779 293 ntBASIC19.4■□□□□ 0.7
NECTIN4Q96NY8 AL773604.1-201ENST00000617417 272 ntBASIC19.4■□□□□ 0.7
NECTIN4Q96NY8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.4■□□□□ 0.7
NECTIN4Q96NY8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NECTIN4Q96NY8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NECTIN4Q96NY8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NECTIN4Q96NY8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.4■□□□□ 0.7
NECTIN4Q96NY8 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NECTIN4Q96NY8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
NECTIN4Q96NY8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NECTIN4Q96NY8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NECTIN4Q96NY8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NECTIN4Q96NY8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.4■□□□□ 0.7
NECTIN4Q96NY8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
NECTIN4Q96NY8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
NECTIN4Q96NY8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NECTIN4Q96NY8 AL512353.2-201ENST00000448759 1962 ntBASIC19.39■□□□□ 0.7
NECTIN4Q96NY8 AC008556.1-201ENST00000610908 2040 ntBASIC19.39■□□□□ 0.69
NECTIN4Q96NY8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.39■□□□□ 0.69
NECTIN4Q96NY8 MIR574-201ENST00000385209 96 ntBASIC19.39■□□□□ 0.69
NECTIN4Q96NY8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.39■□□□□ 0.69
NECTIN4Q96NY8 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NECTIN4Q96NY8 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.39■□□□□ 0.69
NECTIN4Q96NY8 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.39■□□□□ 0.69
NECTIN4Q96NY8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.39■□□□□ 0.69
NECTIN4Q96NY8 AC024563.2-201ENST00000603282 481 ntBASIC19.39■□□□□ 0.69
NECTIN4Q96NY8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.39■□□□□ 0.69
NECTIN4Q96NY8 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.39■□□□□ 0.69
NECTIN4Q96NY8 IL9RP2-201ENST00000423948 1312 ntBASIC19.39■□□□□ 0.69
NECTIN4Q96NY8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NECTIN4Q96NY8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NECTIN4Q96NY8 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.39■□□□□ 0.69
NECTIN4Q96NY8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
NECTIN4Q96NY8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.39■□□□□ 0.69
NECTIN4Q96NY8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NECTIN4Q96NY8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NECTIN4Q96NY8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NECTIN4Q96NY8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NECTIN4Q96NY8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NECTIN4Q96NY8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NECTIN4Q96NY8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.38■□□□□ 0.69
NECTIN4Q96NY8 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NECTIN4Q96NY8 MIR564-202ENST00000385049 94 ntBASIC19.38■□□□□ 0.69
NECTIN4Q96NY8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.38■□□□□ 0.69
NECTIN4Q96NY8 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NECTIN4Q96NY8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.38■□□□□ 0.69
NECTIN4Q96NY8 NUS1P2-201ENST00000417358 873 ntBASIC19.38■□□□□ 0.69
NECTIN4Q96NY8 POM121L3P-201ENST00000419331 1163 ntBASIC19.38■□□□□ 0.69
NECTIN4Q96NY8 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
NECTIN4Q96NY8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NECTIN4Q96NY8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NECTIN4Q96NY8 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
NECTIN4Q96NY8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.38■□□□□ 0.69
NECTIN4Q96NY8 AF238378.1-201ENST00000526806 358 ntBASIC19.38■□□□□ 0.69
NECTIN4Q96NY8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.38■□□□□ 0.69
NECTIN4Q96NY8 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.38■□□□□ 0.69
NECTIN4Q96NY8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NECTIN4Q96NY8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.38■□□□□ 0.69
NECTIN4Q96NY8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.38■□□□□ 0.69
NECTIN4Q96NY8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
NECTIN4Q96NY8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NECTIN4Q96NY8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NECTIN4Q96NY8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NECTIN4Q96NY8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
NECTIN4Q96NY8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
NECTIN4Q96NY8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.37■□□□□ 0.69
NECTIN4Q96NY8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NECTIN4Q96NY8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NECTIN4Q96NY8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NECTIN4Q96NY8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NECTIN4Q96NY8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.37■□□□□ 0.69
NECTIN4Q96NY8 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NECTIN4Q96NY8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
NECTIN4Q96NY8 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.37■□□□□ 0.69
NECTIN4Q96NY8 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.37■□□□□ 0.69
NECTIN4Q96NY8 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.37■□□□□ 0.69
NECTIN4Q96NY8 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
NECTIN4Q96NY8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.37■□□□□ 0.69
NECTIN4Q96NY8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
NECTIN4Q96NY8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.37■□□□□ 0.69
NECTIN4Q96NY8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms