Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHAMP1Q96JM3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CHAMP1Q96JM3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHAMP1Q96JM3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CHAMP1Q96JM3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHAMP1Q96JM3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHAMP1Q96JM3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.74■■□□□ 1.07
CHAMP1Q96JM3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.74■■□□□ 1.07
CHAMP1Q96JM3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CHAMP1Q96JM3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHAMP1Q96JM3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.74■■□□□ 1.07
CHAMP1Q96JM3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHAMP1Q96JM3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHAMP1Q96JM3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CHAMP1Q96JM3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CHAMP1Q96JM3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.74■■□□□ 1.07
CHAMP1Q96JM3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.74■■□□□ 1.07
CHAMP1Q96JM3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.74■■□□□ 1.07
CHAMP1Q96JM3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHAMP1Q96JM3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHAMP1Q96JM3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CHAMP1Q96JM3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.73■■□□□ 1.07
CHAMP1Q96JM3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC21.72■■□□□ 1.07
CHAMP1Q96JM3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHAMP1Q96JM3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CHAMP1Q96JM3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CHAMP1Q96JM3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHAMP1Q96JM3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CHAMP1Q96JM3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.72■■□□□ 1.07
CHAMP1Q96JM3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.72■■□□□ 1.07
CHAMP1Q96JM3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
CHAMP1Q96JM3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.72■■□□□ 1.07
CHAMP1Q96JM3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.72■■□□□ 1.07
CHAMP1Q96JM3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.72■■□□□ 1.07
CHAMP1Q96JM3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.72■■□□□ 1.07
CHAMP1Q96JM3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.72■■□□□ 1.07
CHAMP1Q96JM3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.72■■□□□ 1.07
CHAMP1Q96JM3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.72■■□□□ 1.07
CHAMP1Q96JM3 AC068587.9-201ENST00000641814 219 ntBASIC21.72■■□□□ 1.07
CHAMP1Q96JM3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHAMP1Q96JM3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHAMP1Q96JM3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHAMP1Q96JM3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
CHAMP1Q96JM3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHAMP1Q96JM3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC21.72■■□□□ 1.07
CHAMP1Q96JM3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHAMP1Q96JM3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHAMP1Q96JM3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHAMP1Q96JM3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.71■■□□□ 1.07
CHAMP1Q96JM3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHAMP1Q96JM3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.71■■□□□ 1.07
CHAMP1Q96JM3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CHAMP1Q96JM3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHAMP1Q96JM3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHAMP1Q96JM3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHAMP1Q96JM3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHAMP1Q96JM3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.71■■□□□ 1.07
CHAMP1Q96JM3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CHAMP1Q96JM3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHAMP1Q96JM3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHAMP1Q96JM3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CHAMP1Q96JM3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHAMP1Q96JM3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHAMP1Q96JM3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHAMP1Q96JM3 KRT8P11-201ENST00000409686 1436 ntBASIC21.71■■□□□ 1.07
CHAMP1Q96JM3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.71■■□□□ 1.07
CHAMP1Q96JM3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CHAMP1Q96JM3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.7■■□□□ 1.07
CHAMP1Q96JM3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms