Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCPIP1Q96JH7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.76■□□□□ 0.75
VCPIP1Q96JH7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.76■□□□□ 0.75
VCPIP1Q96JH7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VCPIP1Q96JH7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.76■□□□□ 0.75
VCPIP1Q96JH7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.76■□□□□ 0.75
VCPIP1Q96JH7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCPIP1Q96JH7 AC126763.1-201ENST00000552015 2118 ntBASIC19.76■□□□□ 0.75
VCPIP1Q96JH7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCPIP1Q96JH7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VCPIP1Q96JH7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCPIP1Q96JH7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCPIP1Q96JH7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VCPIP1Q96JH7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VCPIP1Q96JH7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
VCPIP1Q96JH7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.75■□□□□ 0.75
VCPIP1Q96JH7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.75■□□□□ 0.75
VCPIP1Q96JH7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.75■□□□□ 0.75
VCPIP1Q96JH7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.75■□□□□ 0.75
VCPIP1Q96JH7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.75■□□□□ 0.75
VCPIP1Q96JH7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCPIP1Q96JH7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VCPIP1Q96JH7 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.75■□□□□ 0.75
VCPIP1Q96JH7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.75■□□□□ 0.75
VCPIP1Q96JH7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.75■□□□□ 0.75
VCPIP1Q96JH7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
VCPIP1Q96JH7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.75■□□□□ 0.75
VCPIP1Q96JH7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCPIP1Q96JH7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VCPIP1Q96JH7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCPIP1Q96JH7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.75■□□□□ 0.75
VCPIP1Q96JH7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
VCPIP1Q96JH7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.75■□□□□ 0.75
VCPIP1Q96JH7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
VCPIP1Q96JH7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCPIP1Q96JH7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCPIP1Q96JH7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCPIP1Q96JH7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCPIP1Q96JH7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.74■□□□□ 0.75
VCPIP1Q96JH7 AIRN-201ENST00000601203 4374 ntBASIC19.74■□□□□ 0.75
VCPIP1Q96JH7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.74■□□□□ 0.75
VCPIP1Q96JH7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.74■□□□□ 0.75
VCPIP1Q96JH7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCPIP1Q96JH7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
VCPIP1Q96JH7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.74■□□□□ 0.75
VCPIP1Q96JH7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
VCPIP1Q96JH7 AL023284.2-201ENST00000405850 579 ntBASIC19.74■□□□□ 0.75
VCPIP1Q96JH7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VCPIP1Q96JH7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.74■□□□□ 0.75
VCPIP1Q96JH7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.74■□□□□ 0.75
VCPIP1Q96JH7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.74■□□□□ 0.75
VCPIP1Q96JH7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VCPIP1Q96JH7 AP003071.4-201ENST00000562276 1284 ntBASIC19.74■□□□□ 0.75
VCPIP1Q96JH7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.74■□□□□ 0.75
VCPIP1Q96JH7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.74■□□□□ 0.75
VCPIP1Q96JH7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.74■□□□□ 0.75
VCPIP1Q96JH7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
VCPIP1Q96JH7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.74■□□□□ 0.75
VCPIP1Q96JH7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VCPIP1Q96JH7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.74■□□□□ 0.75
VCPIP1Q96JH7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCPIP1Q96JH7 AL499627.1-201ENST00000569373 2188 ntBASIC19.74■□□□□ 0.75
VCPIP1Q96JH7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 AC008556.1-201ENST00000610908 2040 ntBASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 MIR564-202ENST00000385049 94 ntBASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 MIR1224-201ENST00000408193 85 ntBASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 CRYGFP-201ENST00000418459 633 ntBASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 SNORA78-201ENST00000459373 127 ntBASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VCPIP1Q96JH7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms