Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.89■□□□□ 0.29
LRRC46Q96FV0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.89■□□□□ 0.29
LRRC46Q96FV0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC46Q96FV0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC46Q96FV0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LRRC46Q96FV0 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC46Q96FV0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC46Q96FV0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LRRC46Q96FV0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
LRRC46Q96FV0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC46Q96FV0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC46Q96FV0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC46Q96FV0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC46Q96FV0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRC46Q96FV0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LRRC46Q96FV0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC46Q96FV0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRC46Q96FV0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LRRC46Q96FV0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
LRRC46Q96FV0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC46Q96FV0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC46Q96FV0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC46Q96FV0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRC46Q96FV0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRC46Q96FV0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.88■□□□□ 0.29
LRRC46Q96FV0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC46Q96FV0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC46Q96FV0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC46Q96FV0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 AC007613.1-201ENST00000572811 2597 ntBASIC16.87■□□□□ 0.29
LRRC46Q96FV0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.87■□□□□ 0.29
LRRC46Q96FV0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC46Q96FV0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC46Q96FV0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC46Q96FV0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC46Q96FV0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC46Q96FV0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
LRRC46Q96FV0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC46Q96FV0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.86■□□□□ 0.29
LRRC46Q96FV0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.86■□□□□ 0.29
LRRC46Q96FV0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC46Q96FV0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.86■□□□□ 0.29
LRRC46Q96FV0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC46Q96FV0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC46Q96FV0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC46Q96FV0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
LRRC46Q96FV0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC46Q96FV0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.86■□□□□ 0.29
LRRC46Q96FV0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.86■□□□□ 0.29
LRRC46Q96FV0 AL121956.5-201ENST00000625261 221 ntBASIC16.86■□□□□ 0.29
LRRC46Q96FV0 AP000550.4-202ENST00000639755 178 ntBASIC16.86■□□□□ 0.29
LRRC46Q96FV0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC46Q96FV0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC46Q96FV0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC46Q96FV0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.86■□□□□ 0.29
LRRC46Q96FV0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC46Q96FV0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC46Q96FV0 AC020907.5-201ENST00000624372 1936 ntBASIC16.86■□□□□ 0.29
LRRC46Q96FV0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC46Q96FV0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.86■□□□□ 0.29
LRRC46Q96FV0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC46Q96FV0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC46Q96FV0 AC009237.14-201ENST00000609975 1594 ntBASIC16.85■□□□□ 0.29
LRRC46Q96FV0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC46Q96FV0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC46Q96FV0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC46Q96FV0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms