Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC47A1Q96FL8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC47A1Q96FL8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC47A1Q96FL8 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
SLC47A1Q96FL8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC47A1Q96FL8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC47A1Q96FL8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SLC47A1Q96FL8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC47A1Q96FL8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
SLC47A1Q96FL8 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC47A1Q96FL8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC47A1Q96FL8 KRT18P16-201ENST00000510337 1294 ntBASIC17.7■□□□□ 0.42
SLC47A1Q96FL8 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SLC47A1Q96FL8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC47A1Q96FL8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC47A1Q96FL8 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC47A1Q96FL8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC47A1Q96FL8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SLC47A1Q96FL8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC47A1Q96FL8 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC47A1Q96FL8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC47A1Q96FL8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SLC47A1Q96FL8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC47A1Q96FL8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC47A1Q96FL8 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC47A1Q96FL8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 HLA-L-209ENST00000420110 1011 ntBASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 TUBB8P6-201ENST00000436895 1288 ntBASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
SLC47A1Q96FL8 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC47A1Q96FL8 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC47A1Q96FL8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC47A1Q96FL8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC47A1Q96FL8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SLC47A1Q96FL8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC47A1Q96FL8 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC47A1Q96FL8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC47A1Q96FL8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC47A1Q96FL8 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC47A1Q96FL8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SLC47A1Q96FL8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC47A1Q96FL8 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
SLC47A1Q96FL8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.68■□□□□ 0.42
SLC47A1Q96FL8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SLC47A1Q96FL8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC47A1Q96FL8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.68■□□□□ 0.42
SLC47A1Q96FL8 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SLC47A1Q96FL8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC47A1Q96FL8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC47A1Q96FL8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC47A1Q96FL8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC47A1Q96FL8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC47A1Q96FL8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC47A1Q96FL8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC47A1Q96FL8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC47A1Q96FL8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SLC47A1Q96FL8 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SLC47A1Q96FL8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC47A1Q96FL8 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC47A1Q96FL8 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC47A1Q96FL8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC47A1Q96FL8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC47A1Q96FL8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC47A1Q96FL8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SLC47A1Q96FL8 POM121L13P-201ENST00000422362 380 ntBASIC17.67■□□□□ 0.42
SLC47A1Q96FL8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC47A1Q96FL8 UNC93B5-201ENST00000530315 699 ntBASIC17.67■□□□□ 0.42
SLC47A1Q96FL8 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC47A1Q96FL8 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC47A1Q96FL8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC47A1Q96FL8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms