Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01006Q8NI28 AC006333.2-201ENST00000607957 2099 ntBASIC14.57□□□□□ -0.08
LINC01006Q8NI28 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 IRX1P1-201ENST00000438849 1838 ntBASIC14.57□□□□□ -0.08
LINC01006Q8NI28 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 AL390719.2-201ENST00000606993 987 ntBASIC14.57□□□□□ -0.08
LINC01006Q8NI28 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC01006Q8NI28 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01006Q8NI28 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01006Q8NI28 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.56□□□□□ -0.08
LINC01006Q8NI28 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01006Q8NI28 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.56□□□□□ -0.08
LINC01006Q8NI28 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01006Q8NI28 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LINC01006Q8NI28 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01006Q8NI28 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
LINC01006Q8NI28 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01006Q8NI28 KRT18P31-201ENST00000506277 1292 ntBASIC14.56□□□□□ -0.08
LINC01006Q8NI28 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01006Q8NI28 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.56□□□□□ -0.08
LINC01006Q8NI28 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.56□□□□□ -0.08
LINC01006Q8NI28 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01006Q8NI28 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01006Q8NI28 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01006Q8NI28 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.56□□□□□ -0.08
LINC01006Q8NI28 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01006Q8NI28 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01006Q8NI28 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LINC01006Q8NI28 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01006Q8NI28 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC14.56□□□□□ -0.08
LINC01006Q8NI28 AC125437.2-201ENST00000625180 2167 ntBASIC14.56□□□□□ -0.08
LINC01006Q8NI28 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01006Q8NI28 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC14.56□□□□□ -0.08
LINC01006Q8NI28 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 PCDHAC2-203ENST00000615316 3011 ntBASIC14.55□□□□□ -0.08
LINC01006Q8NI28 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 GPR32P1-201ENST00000601788 811 ntBASIC14.55□□□□□ -0.08
LINC01006Q8NI28 AL031008.1-201ENST00000619963 541 ntBASIC14.55□□□□□ -0.08
LINC01006Q8NI28 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01006Q8NI28 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms