Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.34■□□□□ 0.53
CPSF7Q8N684 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
CPSF7Q8N684 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.34■□□□□ 0.53
CPSF7Q8N684 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.34■□□□□ 0.53
CPSF7Q8N684 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.34■□□□□ 0.53
CPSF7Q8N684 Z99916.2-201ENST00000604037 246 ntBASIC18.34■□□□□ 0.53
CPSF7Q8N684 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CPSF7Q8N684 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.34■□□□□ 0.53
CPSF7Q8N684 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPSF7Q8N684 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CPSF7Q8N684 AC124283.5-201ENST00000624661 1809 ntBASIC18.34■□□□□ 0.53
CPSF7Q8N684 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CPSF7Q8N684 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.34■□□□□ 0.53
CPSF7Q8N684 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CPSF7Q8N684 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPSF7Q8N684 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.34■□□□□ 0.53
CPSF7Q8N684 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CPSF7Q8N684 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
CPSF7Q8N684 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CPSF7Q8N684 AC008764.6-201ENST00000595909 2069 ntBASIC18.34■□□□□ 0.53
CPSF7Q8N684 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CPSF7Q8N684 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPSF7Q8N684 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CPSF7Q8N684 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CPSF7Q8N684 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.33■□□□□ 0.53
CPSF7Q8N684 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPSF7Q8N684 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPSF7Q8N684 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPSF7Q8N684 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPSF7Q8N684 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CPSF7Q8N684 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPSF7Q8N684 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPSF7Q8N684 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.33■□□□□ 0.52
CPSF7Q8N684 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPSF7Q8N684 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPSF7Q8N684 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPSF7Q8N684 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPSF7Q8N684 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPSF7Q8N684 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CPSF7Q8N684 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.33■□□□□ 0.52
CPSF7Q8N684 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPSF7Q8N684 KRT18P16-201ENST00000510337 1294 ntBASIC18.33■□□□□ 0.52
CPSF7Q8N684 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.33■□□□□ 0.52
CPSF7Q8N684 AC126763.1-201ENST00000552015 2118 ntBASIC18.33■□□□□ 0.52
CPSF7Q8N684 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.33■□□□□ 0.52
CPSF7Q8N684 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.33■□□□□ 0.52
CPSF7Q8N684 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CPSF7Q8N684 AC124016.1-201ENST00000609552 612 ntBASIC18.33■□□□□ 0.52
CPSF7Q8N684 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPSF7Q8N684 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPSF7Q8N684 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPSF7Q8N684 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.33■□□□□ 0.52
CPSF7Q8N684 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPSF7Q8N684 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.33■□□□□ 0.52
CPSF7Q8N684 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPSF7Q8N684 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPSF7Q8N684 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.33■□□□□ 0.52
CPSF7Q8N684 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPSF7Q8N684 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPSF7Q8N684 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPSF7Q8N684 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPSF7Q8N684 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPSF7Q8N684 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CPSF7Q8N684 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPSF7Q8N684 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPSF7Q8N684 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CPSF7Q8N684 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPSF7Q8N684 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CPSF7Q8N684 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.32■□□□□ 0.52
CPSF7Q8N684 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.32■□□□□ 0.52
CPSF7Q8N684 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.32■□□□□ 0.52
CPSF7Q8N684 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.32■□□□□ 0.52
CPSF7Q8N684 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.32■□□□□ 0.52
CPSF7Q8N684 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.32■□□□□ 0.52
CPSF7Q8N684 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CPSF7Q8N684 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
CPSF7Q8N684 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPSF7Q8N684 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.32■□□□□ 0.52
CPSF7Q8N684 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPSF7Q8N684 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPSF7Q8N684 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPSF7Q8N684 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPSF7Q8N684 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
CPSF7Q8N684 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CPSF7Q8N684 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CPSF7Q8N684 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPSF7Q8N684 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPSF7Q8N684 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPSF7Q8N684 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.31■□□□□ 0.52
CPSF7Q8N684 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPSF7Q8N684 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.31■□□□□ 0.52
CPSF7Q8N684 KRASP1-201ENST00000407852 552 ntBASIC18.31■□□□□ 0.52
CPSF7Q8N684 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.31■□□□□ 0.52
CPSF7Q8N684 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CPSF7Q8N684 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.31■□□□□ 0.52
CPSF7Q8N684 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.31■□□□□ 0.52
CPSF7Q8N684 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.31■□□□□ 0.52
CPSF7Q8N684 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CPSF7Q8N684 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CPSF7Q8N684 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms