Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
HIST3H2BBQ8N257 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HIST3H2BBQ8N257 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HIST3H2BBQ8N257 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HIST3H2BBQ8N257 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.02□□□□□ -0.16
HIST3H2BBQ8N257 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.02□□□□□ -0.16
HIST3H2BBQ8N257 TCAF2P1-201ENST00000291129 2421 ntBASIC14.02□□□□□ -0.16
HIST3H2BBQ8N257 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HIST3H2BBQ8N257 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.02□□□□□ -0.16
HIST3H2BBQ8N257 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
HIST3H2BBQ8N257 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
HIST3H2BBQ8N257 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HIST3H2BBQ8N257 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HIST3H2BBQ8N257 AC116050.2-201ENST00000612102 1779 ntBASIC14.02□□□□□ -0.16
HIST3H2BBQ8N257 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HIST3H2BBQ8N257 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
HIST3H2BBQ8N257 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
HIST3H2BBQ8N257 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HIST3H2BBQ8N257 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HIST3H2BBQ8N257 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
HIST3H2BBQ8N257 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC14.02□□□□□ -0.17
HIST3H2BBQ8N257 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HIST3H2BBQ8N257 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HIST3H2BBQ8N257 AC132872.4-202ENST00000622924 2756 ntBASIC14.02□□□□□ -0.17
HIST3H2BBQ8N257 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HIST3H2BBQ8N257 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.02□□□□□ -0.17
HIST3H2BBQ8N257 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HIST3H2BBQ8N257 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.02□□□□□ -0.17
HIST3H2BBQ8N257 TSPY26P-202ENST00000565928 3884 ntBASIC14.02□□□□□ -0.17
HIST3H2BBQ8N257 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
HIST3H2BBQ8N257 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HIST3H2BBQ8N257 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HIST3H2BBQ8N257 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HIST3H2BBQ8N257 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.02□□□□□ -0.17
HIST3H2BBQ8N257 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.02□□□□□ -0.17
HIST3H2BBQ8N257 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HIST3H2BBQ8N257 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 AC061975.6-201ENST00000579045 1553 ntBASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 AC106886.4-201ENST00000623557 2502 ntBASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 AC007950.2-201ENST00000615045 2347 ntBASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HIST3H2BBQ8N257 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 GDI1-215ENST00000630693 786 ntTSL 4 BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HIST3H2BBQ8N257 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms