Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMC5Q8IY18 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.24■■□□□ 1.31
SMC5Q8IY18 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMC5Q8IY18 ABALON-201ENST00000629058 1903 ntBASIC23.23■■□□□ 1.31
SMC5Q8IY18 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
SMC5Q8IY18 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMC5Q8IY18 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC23.23■■□□□ 1.31
SMC5Q8IY18 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
SMC5Q8IY18 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC23.23■■□□□ 1.31
SMC5Q8IY18 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC23.23■■□□□ 1.31
SMC5Q8IY18 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC23.23■■□□□ 1.31
SMC5Q8IY18 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMC5Q8IY18 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC23.23■■□□□ 1.31
SMC5Q8IY18 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SMC5Q8IY18 AL023284.2-201ENST00000405850 579 ntBASIC23.23■■□□□ 1.31
SMC5Q8IY18 MFAP1P1-201ENST00000442257 1255 ntBASIC23.23■■□□□ 1.31
SMC5Q8IY18 AL158047.1-201ENST00000445918 881 ntBASIC23.23■■□□□ 1.31
SMC5Q8IY18 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC23.23■■□□□ 1.31
SMC5Q8IY18 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC23.23■■□□□ 1.31
SMC5Q8IY18 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
SMC5Q8IY18 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SMC5Q8IY18 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
SMC5Q8IY18 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
SMC5Q8IY18 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMC5Q8IY18 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC23.23■■□□□ 1.31
SMC5Q8IY18 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMC5Q8IY18 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC23.23■■□□□ 1.31
SMC5Q8IY18 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC23.23■■□□□ 1.31
SMC5Q8IY18 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMC5Q8IY18 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
SMC5Q8IY18 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
SMC5Q8IY18 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMC5Q8IY18 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
SMC5Q8IY18 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMC5Q8IY18 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMC5Q8IY18 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMC5Q8IY18 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SMC5Q8IY18 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMC5Q8IY18 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC23.22■■□□□ 1.31
SMC5Q8IY18 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SMC5Q8IY18 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC23.22■■□□□ 1.31
SMC5Q8IY18 FDX2-206ENST00000492239 773 ntTSL 2 BASIC23.22■■□□□ 1.31
SMC5Q8IY18 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMC5Q8IY18 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.22■■□□□ 1.31
SMC5Q8IY18 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC23.22■■□□□ 1.31
SMC5Q8IY18 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC23.22■■□□□ 1.31
SMC5Q8IY18 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SMC5Q8IY18 MYC-208ENST00000641036 567 ntBASIC23.22■■□□□ 1.31
SMC5Q8IY18 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
SMC5Q8IY18 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMC5Q8IY18 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMC5Q8IY18 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC23.22■■□□□ 1.31
SMC5Q8IY18 GPAT2P1-201ENST00000444924 1672 ntBASIC23.22■■□□□ 1.31
SMC5Q8IY18 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SMC5Q8IY18 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMC5Q8IY18 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMC5Q8IY18 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMC5Q8IY18 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
SMC5Q8IY18 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
SMC5Q8IY18 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMC5Q8IY18 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SMC5Q8IY18 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
SMC5Q8IY18 PENK-204ENST00000518770 863 ntTSL 2 BASIC23.21■■□□□ 1.31
SMC5Q8IY18 Z99916.2-201ENST00000604037 246 ntBASIC23.21■■□□□ 1.31
SMC5Q8IY18 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.21■■□□□ 1.31
SMC5Q8IY18 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMC5Q8IY18 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC23.21■■□□□ 1.31
SMC5Q8IY18 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SMC5Q8IY18 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMC5Q8IY18 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SMC5Q8IY18 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC23.21■■□□□ 1.31
SMC5Q8IY18 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SMC5Q8IY18 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMC5Q8IY18 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMC5Q8IY18 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMC5Q8IY18 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC23.2■■□□□ 1.3
SMC5Q8IY18 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMC5Q8IY18 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMC5Q8IY18 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC23.2■■□□□ 1.3
SMC5Q8IY18 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
SMC5Q8IY18 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMC5Q8IY18 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMC5Q8IY18 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMC5Q8IY18 ENSA-205ENST00000361532 792 ntTSL 2 BASIC23.2■■□□□ 1.3
SMC5Q8IY18 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC23.2■■□□□ 1.3
SMC5Q8IY18 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC23.2■■□□□ 1.3
SMC5Q8IY18 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC23.2■■□□□ 1.3
SMC5Q8IY18 CA15P1-201ENST00000481698 905 ntBASIC23.2■■□□□ 1.3
SMC5Q8IY18 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC23.2■■□□□ 1.3
SMC5Q8IY18 SLC25A1P4-201ENST00000567977 778 ntBASIC23.2■■□□□ 1.3
SMC5Q8IY18 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC23.2■■□□□ 1.3
SMC5Q8IY18 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMC5Q8IY18 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMC5Q8IY18 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMC5Q8IY18 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMC5Q8IY18 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMC5Q8IY18 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SMC5Q8IY18 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMC5Q8IY18 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC23.19■■□□□ 1.3
SMC5Q8IY18 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms