Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DHX40Q8IX18 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DHX40Q8IX18 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.85■□□□□ 0.93
DHX40Q8IX18 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DHX40Q8IX18 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.85■□□□□ 0.93
DHX40Q8IX18 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DHX40Q8IX18 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.85■□□□□ 0.93
DHX40Q8IX18 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.85■□□□□ 0.93
DHX40Q8IX18 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
DHX40Q8IX18 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.85■□□□□ 0.93
DHX40Q8IX18 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.85■□□□□ 0.93
DHX40Q8IX18 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.85■□□□□ 0.93
DHX40Q8IX18 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.85■□□□□ 0.93
DHX40Q8IX18 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DHX40Q8IX18 AC134043.2-201ENST00000624206 2238 ntBASIC20.85■□□□□ 0.93
DHX40Q8IX18 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DHX40Q8IX18 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.84■□□□□ 0.93
DHX40Q8IX18 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DHX40Q8IX18 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.84■□□□□ 0.93
DHX40Q8IX18 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DHX40Q8IX18 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DHX40Q8IX18 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
DHX40Q8IX18 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DHX40Q8IX18 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DHX40Q8IX18 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.84■□□□□ 0.93
DHX40Q8IX18 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.84■□□□□ 0.93
DHX40Q8IX18 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.84■□□□□ 0.93
DHX40Q8IX18 Z85996.1-201ENST00000494644 937 ntBASIC20.84■□□□□ 0.93
DHX40Q8IX18 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.84■□□□□ 0.93
DHX40Q8IX18 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
DHX40Q8IX18 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.84■□□□□ 0.93
DHX40Q8IX18 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DHX40Q8IX18 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DHX40Q8IX18 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DHX40Q8IX18 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DHX40Q8IX18 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DHX40Q8IX18 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DHX40Q8IX18 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DHX40Q8IX18 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DHX40Q8IX18 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DHX40Q8IX18 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DHX40Q8IX18 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
DHX40Q8IX18 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DHX40Q8IX18 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DHX40Q8IX18 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.83■□□□□ 0.93
DHX40Q8IX18 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DHX40Q8IX18 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
DHX40Q8IX18 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
DHX40Q8IX18 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
DHX40Q8IX18 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
DHX40Q8IX18 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DHX40Q8IX18 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DHX40Q8IX18 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
DHX40Q8IX18 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.83■□□□□ 0.93
DHX40Q8IX18 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DHX40Q8IX18 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.83■□□□□ 0.93
DHX40Q8IX18 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DHX40Q8IX18 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.83■□□□□ 0.93
DHX40Q8IX18 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
DHX40Q8IX18 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
DHX40Q8IX18 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
DHX40Q8IX18 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DHX40Q8IX18 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
DHX40Q8IX18 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.83■□□□□ 0.92
DHX40Q8IX18 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
DHX40Q8IX18 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DHX40Q8IX18 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.82■□□□□ 0.92
DHX40Q8IX18 NBPF21P-201ENST00000425093 1451 ntBASIC20.82■□□□□ 0.92
DHX40Q8IX18 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DHX40Q8IX18 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.82■□□□□ 0.92
DHX40Q8IX18 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
DHX40Q8IX18 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
DHX40Q8IX18 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DHX40Q8IX18 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DHX40Q8IX18 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DHX40Q8IX18 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DHX40Q8IX18 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
DHX40Q8IX18 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.82■□□□□ 0.92
DHX40Q8IX18 UNC93B4-201ENST00000505679 747 ntBASIC20.82■□□□□ 0.92
DHX40Q8IX18 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.82■□□□□ 0.92
DHX40Q8IX18 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DHX40Q8IX18 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
DHX40Q8IX18 AC066615.1-201ENST00000640911 628 ntBASIC20.82■□□□□ 0.92
DHX40Q8IX18 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.82■□□□□ 0.92
DHX40Q8IX18 AL357033.4-201ENST00000617703 1807 ntBASIC20.82■□□□□ 0.92
DHX40Q8IX18 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DHX40Q8IX18 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
DHX40Q8IX18 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DHX40Q8IX18 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.82■□□□□ 0.92
DHX40Q8IX18 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.82■□□□□ 0.92
DHX40Q8IX18 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
DHX40Q8IX18 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
DHX40Q8IX18 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DHX40Q8IX18 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
DHX40Q8IX18 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.82■□□□□ 0.92
DHX40Q8IX18 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DHX40Q8IX18 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DHX40Q8IX18 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
DHX40Q8IX18 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DHX40Q8IX18 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms