Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL55Q7Z7F7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
MRPL55Q7Z7F7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC12.08□□□□□ -0.47
MRPL55Q7Z7F7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
MRPL55Q7Z7F7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC12.08□□□□□ -0.47
MRPL55Q7Z7F7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 ID1-201ENST00000376105 1233 ntBASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 AC239809.2-201ENST00000415381 517 ntBASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 AC008403.3-201ENST00000598924 454 ntBASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
MRPL55Q7Z7F7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 MTDHP1-201ENST00000605323 784 ntBASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 AC093525.10-201ENST00000625130 1569 ntBASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 HLA-A-209ENST00000638375 975 ntBASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
MRPL55Q7Z7F7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms