Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.79■□□□□ 0.6
USP45Q70EL2 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.79■□□□□ 0.6
USP45Q70EL2 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.79■□□□□ 0.6
USP45Q70EL2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.79■□□□□ 0.6
USP45Q70EL2 RN7SL850P-201ENST00000579959 291 ntBASIC18.79■□□□□ 0.6
USP45Q70EL2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.79■□□□□ 0.6
USP45Q70EL2 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP45Q70EL2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
USP45Q70EL2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP45Q70EL2 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
USP45Q70EL2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP45Q70EL2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP45Q70EL2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
USP45Q70EL2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.78■□□□□ 0.6
USP45Q70EL2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP45Q70EL2 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.78■□□□□ 0.6
USP45Q70EL2 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP45Q70EL2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP45Q70EL2 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP45Q70EL2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP45Q70EL2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP45Q70EL2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.78■□□□□ 0.6
USP45Q70EL2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP45Q70EL2 AC009947.2-201ENST00000444014 672 ntBASIC18.78■□□□□ 0.6
USP45Q70EL2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.78■□□□□ 0.6
USP45Q70EL2 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
USP45Q70EL2 NEK4P2-201ENST00000580004 1012 ntBASIC18.78■□□□□ 0.6
USP45Q70EL2 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.78■□□□□ 0.6
USP45Q70EL2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.78■□□□□ 0.6
USP45Q70EL2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP45Q70EL2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP45Q70EL2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP45Q70EL2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP45Q70EL2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP45Q70EL2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP45Q70EL2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP45Q70EL2 AC006333.2-201ENST00000607957 2099 ntBASIC18.78■□□□□ 0.6
USP45Q70EL2 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.78■□□□□ 0.6
USP45Q70EL2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP45Q70EL2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.78■□□□□ 0.6
USP45Q70EL2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP45Q70EL2 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP45Q70EL2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP45Q70EL2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.77■□□□□ 0.6
USP45Q70EL2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
USP45Q70EL2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP45Q70EL2 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
USP45Q70EL2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP45Q70EL2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP45Q70EL2 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP45Q70EL2 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP45Q70EL2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP45Q70EL2 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.77■□□□□ 0.6
USP45Q70EL2 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.77■□□□□ 0.6
USP45Q70EL2 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.77■□□□□ 0.6
USP45Q70EL2 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
USP45Q70EL2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP45Q70EL2 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.77■□□□□ 0.6
USP45Q70EL2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.77■□□□□ 0.6
USP45Q70EL2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP45Q70EL2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
USP45Q70EL2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP45Q70EL2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.77■□□□□ 0.59
USP45Q70EL2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.77■□□□□ 0.59
USP45Q70EL2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
USP45Q70EL2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP45Q70EL2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP45Q70EL2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP45Q70EL2 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP45Q70EL2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
USP45Q70EL2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.76■□□□□ 0.59
USP45Q70EL2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP45Q70EL2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.76■□□□□ 0.59
USP45Q70EL2 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP45Q70EL2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP45Q70EL2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP45Q70EL2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP45Q70EL2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
USP45Q70EL2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP45Q70EL2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP45Q70EL2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP45Q70EL2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP45Q70EL2 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP45Q70EL2 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP45Q70EL2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.76■□□□□ 0.59
USP45Q70EL2 MIR564-202ENST00000385049 94 ntBASIC18.76■□□□□ 0.59
USP45Q70EL2 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
USP45Q70EL2 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.76■□□□□ 0.59
USP45Q70EL2 AL031432.5-201ENST00000641059 760 ntBASIC18.76■□□□□ 0.59
USP45Q70EL2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP45Q70EL2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.76■□□□□ 0.59
USP45Q70EL2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
USP45Q70EL2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP45Q70EL2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP45Q70EL2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.76■□□□□ 0.59
USP45Q70EL2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.76■□□□□ 0.59
USP45Q70EL2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP45Q70EL2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP45Q70EL2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.75■□□□□ 0.59
USP45Q70EL2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms