Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 MIR4497-201ENST00000583208 89 ntBASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 AL049637.2-201ENST00000641778 930 ntBASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 AP006587.1-201ENST00000534129 1502 ntBASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PPP4R3CPQ6ZMV5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
PPP4R3CPQ6ZMV5 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PPP4R3CPQ6ZMV5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.62■■□□□ 1.05
PPP4R3CPQ6ZMV5 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PPP4R3CPQ6ZMV5 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.62■■□□□ 1.05
PPP4R3CPQ6ZMV5 HTR7P1-201ENST00000538670 1336 ntBASIC21.62■■□□□ 1.05
PPP4R3CPQ6ZMV5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PPP4R3CPQ6ZMV5 VN1R66P-201ENST00000412929 916 ntBASIC21.62■■□□□ 1.05
PPP4R3CPQ6ZMV5 SSR1P2-201ENST00000415208 787 ntBASIC21.62■■□□□ 1.05
PPP4R3CPQ6ZMV5 MTND4P32-201ENST00000437189 1237 ntBASIC21.62■■□□□ 1.05
PPP4R3CPQ6ZMV5 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC21.62■■□□□ 1.05
PPP4R3CPQ6ZMV5 TCAIM-208ENST00000444602 1056 ntTSL 2 BASIC21.62■■□□□ 1.05
PPP4R3CPQ6ZMV5 Z99714.1-201ENST00000450463 807 ntBASIC21.62■■□□□ 1.05
PPP4R3CPQ6ZMV5 AC105313.1-201ENST00000509121 353 ntBASIC21.62■■□□□ 1.05
PPP4R3CPQ6ZMV5 HEXB-205ENST00000509579 806 ntTSL 2 BASIC21.62■■□□□ 1.05
PPP4R3CPQ6ZMV5 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.62■■□□□ 1.05
PPP4R3CPQ6ZMV5 AC078899.4-201ENST00000593952 1113 ntBASIC21.62■■□□□ 1.05
PPP4R3CPQ6ZMV5 AC013244.3-201ENST00000605614 388 ntBASIC21.62■■□□□ 1.05
PPP4R3CPQ6ZMV5 AP001412.1-201ENST00000608405 714 ntBASIC21.62■■□□□ 1.05
PPP4R3CPQ6ZMV5 AC239803.2-201ENST00000610161 430 ntBASIC21.62■■□□□ 1.05
PPP4R3CPQ6ZMV5 AC087893.1-201ENST00000612818 664 ntBASIC21.62■■□□□ 1.05
PPP4R3CPQ6ZMV5 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.62■■□□□ 1.05
PPP4R3CPQ6ZMV5 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
PPP4R3CPQ6ZMV5 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PPP4R3CPQ6ZMV5 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PPP4R3CPQ6ZMV5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.62■■□□□ 1.05
PPP4R3CPQ6ZMV5 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PPP4R3CPQ6ZMV5 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.61■■□□□ 1.05
PPP4R3CPQ6ZMV5 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
PPP4R3CPQ6ZMV5 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC21.61■■□□□ 1.05
PPP4R3CPQ6ZMV5 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
PPP4R3CPQ6ZMV5 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PPP4R3CPQ6ZMV5 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PPP4R3CPQ6ZMV5 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PPP4R3CPQ6ZMV5 Y_RNA.110-201ENST00000363220 99 ntBASIC21.61■■□□□ 1.05
PPP4R3CPQ6ZMV5 RNU6-925P-201ENST00000384629 104 ntBASIC21.61■■□□□ 1.05
PPP4R3CPQ6ZMV5 AL353807.1-201ENST00000427475 662 ntBASIC21.61■■□□□ 1.05
PPP4R3CPQ6ZMV5 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.61■■□□□ 1.05
PPP4R3CPQ6ZMV5 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PPP4R3CPQ6ZMV5 NDUFC1-206ENST00000505036 809 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PPP4R3CPQ6ZMV5 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PPP4R3CPQ6ZMV5 COL6A4P2-205ENST00000509855 506 ntBASIC21.61■■□□□ 1.05
PPP4R3CPQ6ZMV5 AC007066.2-202ENST00000566531 914 ntBASIC21.61■■□□□ 1.05
PPP4R3CPQ6ZMV5 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC21.61■■□□□ 1.05
PPP4R3CPQ6ZMV5 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.61■■□□□ 1.05
PPP4R3CPQ6ZMV5 AC006116.5-201ENST00000591936 559 ntBASIC21.61■■□□□ 1.05
PPP4R3CPQ6ZMV5 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC21.61■■□□□ 1.05
PPP4R3CPQ6ZMV5 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.61■■□□□ 1.05
PPP4R3CPQ6ZMV5 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
PPP4R3CPQ6ZMV5 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
PPP4R3CPQ6ZMV5 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.6■■□□□ 1.05
PPP4R3CPQ6ZMV5 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PPP4R3CPQ6ZMV5 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP4R3CPQ6ZMV5 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP4R3CPQ6ZMV5 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP4R3CPQ6ZMV5 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP4R3CPQ6ZMV5 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP4R3CPQ6ZMV5 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PPP4R3CPQ6ZMV5 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC21.6■■□□□ 1.05
PPP4R3CPQ6ZMV5 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.6■■□□□ 1.05
PPP4R3CPQ6ZMV5 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PPP4R3CPQ6ZMV5 YBX1P10-201ENST00000444752 975 ntBASIC21.6■■□□□ 1.05
PPP4R3CPQ6ZMV5 UBE2D3-211ENST00000502404 574 ntTSL 4 BASIC21.6■■□□□ 1.05
PPP4R3CPQ6ZMV5 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC21.6■■□□□ 1.05
PPP4R3CPQ6ZMV5 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC21.6■■□□□ 1.05
PPP4R3CPQ6ZMV5 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC21.6■■□□□ 1.05
PPP4R3CPQ6ZMV5 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.6■■□□□ 1.05
PPP4R3CPQ6ZMV5 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.6■■□□□ 1.05
PPP4R3CPQ6ZMV5 AC113410.3-201ENST00000623366 203 ntBASIC21.6■■□□□ 1.05
PPP4R3CPQ6ZMV5 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.6■■□□□ 1.05
PPP4R3CPQ6ZMV5 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP4R3CPQ6ZMV5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP4R3CPQ6ZMV5 CBWD3-206ENST00000478048 1736 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PPP4R3CPQ6ZMV5 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PPP4R3CPQ6ZMV5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP4R3CPQ6ZMV5 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP4R3CPQ6ZMV5 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms