RNA–Protein interactions for RNA: ENST00000441383.5

GACAT1-202, gastric cancer associated transcript 1, humanhuman

TSL 4 BASIC

Gene GACAT1, Length 540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT1-202ENST00000441383 AEBP2Q6ZN18 517 aaPredicted RBP32.3■■■□□ 2.76
GACAT1-202ENST00000441383 CHIC1Q5VXU3 224 aa30.74■■■□□ 2.51
GACAT1-202ENST00000441383 SENP3Q9H4L4 574 aaPredicted RBP27.42■■□□□ 1.98
GACAT1-202ENST00000441383 PHF23Q9BUL5 403 aaPredicted RBP27.14■■□□□ 1.94
GACAT1-202ENST00000441383 FOXD1Q16676 465 aa25.61■■□□□ 1.69
GACAT1-202ENST00000441383 PLPPR3Q6T4P5 718 aa24.6■■□□□ 1.53
GACAT1-202ENST00000441383 PPP6R1Q9UPN7 881 aa24.1■■□□□ 1.45
GACAT1-202ENST00000441383 ADRA2BP18089 450 aa24.01■■□□□ 1.43
GACAT1-202ENST00000441383 PIAS4Q8N2W9 510 aaPredicted RBP23.94■■□□□ 1.42
GACAT1-202ENST00000441383 MSH5O43196 834 aa23.83■■□□□ 1.41
GACAT1-202ENST00000441383 POTEDQ86YR6 584 aa23.09■■□□□ 1.29
GACAT1-202ENST00000441383 MAPK8IP2Q13387 824 aaPredicted RBP22.04■■□□□ 1.12
GACAT1-202ENST00000441383 SCAF1Q9H7N4 1312 aaKnown RBP21.86■■□□□ 1.09
GACAT1-202ENST00000441383 DMRT2Q9Y5R5 561 aa21.79■■□□□ 1.08
GACAT1-202ENST00000441383 PPP4R3CPQ6ZMV5 832 aa21.62■■□□□ 1.05
GACAT1-202ENST00000441383 CNKSR2Q8WXI2 1034 aa21.14■□□□□ 0.97
GACAT1-202ENST00000441383 HOXD11P31277 338 aaPredicted RBP21.05■□□□□ 0.96
GACAT1-202ENST00000441383 RNF216Q9NWF9 866 aaPredicted RBP20.92■□□□□ 0.94
GACAT1-202ENST00000441383 DCAF8L1A6NGE4 600 aa20.9■□□□□ 0.94
GACAT1-202ENST00000441383 NCBP3Q53F19 620 aaKnown RBP20.76■□□□□ 0.91
GACAT1-202ENST00000441383 NPM3O75607 178 aaKnown RBP20.54■□□□□ 0.88
GACAT1-202ENST00000441383 CACNB1Q02641 598 aaPredicted RBP20.4■□□□□ 0.86
GACAT1-202ENST00000441383 RNF39Q9H2S5 420 aa20.4■□□□□ 0.86
GACAT1-202ENST00000441383 KCNA4P22459 653 aa20.3■□□□□ 0.84
GACAT1-202ENST00000441383 DNAJC5BQ9UF47 199 aa20.23■□□□□ 0.83
GACAT1-202ENST00000441383 C1QBPQ07021 282 aaKnown RBP20.07■□□□□ 0.8
GACAT1-202ENST00000441383 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.05■□□□□ 0.8
GACAT1-202ENST00000441383 U3KPZ7 1027 aaPredicted RBP19.68■□□□□ 0.74
GACAT1-202ENST00000441383 SLC4A2P04920 1241 aa19.61■□□□□ 0.73
GACAT1-202ENST00000441383 SPINK5Q9NQ38 1064 aaPredicted RBP19.37■□□□□ 0.69
GACAT1-202ENST00000441383 CAPN15O75808 1086 aa19.29■□□□□ 0.68
GACAT1-202ENST00000441383 DSG3P32926 999 aa19.16■□□□□ 0.66
GACAT1-202ENST00000441383 SLC4A1APQ9BWU0 796 aaKnown RBP19.15■□□□□ 0.66
GACAT1-202ENST00000441383 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.07■□□□□ 0.64
GACAT1-202ENST00000441383 HNRNPUL2Q1KMD3 747 aaKnown RBP19.07■□□□□ 0.64
GACAT1-202ENST00000441383 TRHP20396 242 aaPredicted RBP19.03■□□□□ 0.64
GACAT1-202ENST00000441383 APLP2Q06481 763 aa19.01■□□□□ 0.63
GACAT1-202ENST00000441383 SAMD1Q6SPF0 538 aaPredicted RBP18.99■□□□□ 0.63
GACAT1-202ENST00000441383 MYCNP04198 464 aaPredicted RBP18.94■□□□□ 0.62
GACAT1-202ENST00000441383 ZNF219Q9P2Y4 722 aaPredicted RBP18.94■□□□□ 0.62
GACAT1-202ENST00000441383 ABCB7O75027 752 aa18.9■□□□□ 0.62
GACAT1-202ENST00000441383 FOXD4L1Q9NU39 408 aa18.84■□□□□ 0.61
GACAT1-202ENST00000441383 ZBTB22O15209 634 aa18.7■□□□□ 0.58
GACAT1-202ENST00000441383 ATF5Q9Y2D1 282 aaPredicted RBP18.6■□□□□ 0.57
GACAT1-202ENST00000441383 POLA2Q14181 598 aa18.56■□□□□ 0.56
GACAT1-202ENST00000441383 ATXN8OSP0DMR3 200 aa18.21■□□□□ 0.51
GACAT1-202ENST00000441383 RBM42Q9BTD8 480 aaKnown RBP18.2■□□□□ 0.5
GACAT1-202ENST00000441383 POTEHQ6S545 545 aa18.11■□□□□ 0.49
GACAT1-202ENST00000441383 ZBTB12Q9Y330 459 aaPredicted RBP18.09■□□□□ 0.49
GACAT1-202ENST00000441383 OSCARQ8IYS5 282 aa17.96■□□□□ 0.47
GACAT1-202ENST00000441383 CSRNP3Q8WYN3 585 aa17.94■□□□□ 0.46
GACAT1-202ENST00000441383 AKT1S1Q96B36 256 aa17.84■□□□□ 0.45
GACAT1-202ENST00000441383 CHRDL2Q6WN34 429 aa17.8■□□□□ 0.44
GACAT1-202ENST00000441383 EHMT2Q96KQ7 1210 aa17.79■□□□□ 0.44
GACAT1-202ENST00000441383 FBLN2P98095 1184 aa17.74■□□□□ 0.43
GACAT1-202ENST00000441383 MKRN4PQ13434 485 aaPredicted RBP17.73■□□□□ 0.43
GACAT1-202ENST00000441383 REM2Q8IYK8 340 aaPredicted RBP17.71■□□□□ 0.43
GACAT1-202ENST00000441383 SPDYE2BA6NHP3 402 aa17.59■□□□□ 0.41
GACAT1-202ENST00000441383 SPDYE6P0CI01 402 aa17.59■□□□□ 0.41
GACAT1-202ENST00000441383 SPDYE2Q495Y8 402 aa17.59■□□□□ 0.41
GACAT1-202ENST00000441383 PITPNM1O00562 1244 aa17.53■□□□□ 0.4
GACAT1-202ENST00000441383 PIP4P2Q8N4L2 257 aa17.43■□□□□ 0.38
GACAT1-202ENST00000441383 ZNF692Q9BU19 519 aaPredicted RBP17.43■□□□□ 0.38
GACAT1-202ENST00000441383 SSUH2Q9Y2M2 353 aa17.4■□□□□ 0.38
GACAT1-202ENST00000441383 FXR2P51116 673 aaKnown RBP eCLIP17.34■□□□□ 0.37
GACAT1-202ENST00000441383 CLEC11AQ9Y240 323 aa17.25■□□□□ 0.35
GACAT1-202ENST00000441383 SPDYE1Q8NFV5 336 aaPredicted RBP17.24■□□□□ 0.35
GACAT1-202ENST00000441383 PABPN1Q86U42 306 aaKnown RBP eCLIP17.19■□□□□ 0.34
GACAT1-202ENST00000441383 PRKAR2AP13861 404 aaKnown RBP17.07■□□□□ 0.32
GACAT1-202ENST00000441383 HAX1O00165 279 aa17.06■□□□□ 0.32
GACAT1-202ENST00000441383 SP7Q8TDD2 431 aaPredicted RBP17.04■□□□□ 0.32
GACAT1-202ENST00000441383 PRR29P0C7W0 189 aa16.97■□□□□ 0.31
GACAT1-202ENST00000441383 CHADLQ6NUI6 762 aa16.95■□□□□ 0.3
GACAT1-202ENST00000441383 EVX2Q03828 476 aa16.94■□□□□ 0.3
GACAT1-202ENST00000441383 SPDYE4A6NLX3 237 aa16.91■□□□□ 0.3
GACAT1-202ENST00000441383 C19orf67A6NJJ6 358 aa16.78■□□□□ 0.28
GACAT1-202ENST00000441383 STAG3Q9UJ98 1225 aa16.68■□□□□ 0.26
GACAT1-202ENST00000441383 FARP1Q9Y4F1 1045 aaPredicted RBP16.67■□□□□ 0.26
GACAT1-202ENST00000441383 CREBZFQ9NS37 354 aa16.62■□□□□ 0.25
GACAT1-202ENST00000441383 CD44P16070 742 aaKnown RBP16.53■□□□□ 0.24
GACAT1-202ENST00000441383 PROM2Q8N271 834 aa16.53■□□□□ 0.24
GACAT1-202ENST00000441383 GABBR2O75899 941 aa16.51■□□□□ 0.23
GACAT1-202ENST00000441383 MNX1P50219 401 aaPredicted RBP16.36■□□□□ 0.21
GACAT1-202ENST00000441383 ZRANB1Q9UGI0 708 aa16.32■□□□□ 0.2
GACAT1-202ENST00000441383 ZNF579Q8NAF0 562 aaKnown RBP16.27■□□□□ 0.2
GACAT1-202ENST00000441383 NPM1P06748 294 aaKnown RBP eCLIP16.24■□□□□ 0.19
GACAT1-202ENST00000441383 FKBP8Q14318 412 aa16.24■□□□□ 0.19
GACAT1-202ENST00000441383 POTEIP0CG38 1075 aa16.2■□□□□ 0.18
GACAT1-202ENST00000441383 CLCN6P51797 869 aa16.18■□□□□ 0.18
GACAT1-202ENST00000441383 PAK3O75914 559 aaPredicted RBP16.15■□□□□ 0.18
GACAT1-202ENST00000441383 PHF12Q96QT6 1004 aa16.14■□□□□ 0.17
GACAT1-202ENST00000441383 MIER1Q8N108 512 aa16.12■□□□□ 0.17
GACAT1-202ENST00000441383 GALR2O43603 387 aaPredicted RBP16.11■□□□□ 0.17
GACAT1-202ENST00000441383 DCBLD2Q96PD2 775 aa16.06■□□□□ 0.16
GACAT1-202ENST00000441383 TSPYL2Q9H2G4 693 aaPredicted RBP16.02■□□□□ 0.16
GACAT1-202ENST00000441383 PLEKHG5O94827 1062 aa16.01■□□□□ 0.15
GACAT1-202ENST00000441383 PLCD3Q8N3E9 789 aa16■□□□□ 0.15
GACAT1-202ENST00000441383 LHX8Q68G74 356 aa15.99■□□□□ 0.15
GACAT1-202ENST00000441383 CCDC61Q9Y6R9 512 aa15.94■□□□□ 0.14
GACAT1-202ENST00000441383 RASEFQ8IZ41 740 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms