RNA–Protein interactions for RNA: ENST00000415208.1

SSR1P2-201, Transcript of signal sequence receptor subunit 1 pseudogene 2, humanhuman

BASIC

Gene SSR1P2, Length 787 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P2-201ENST00000415208 AEBP2Q6ZN18 517 aaPredicted RBP31.71■■■□□ 2.67
SSR1P2-201ENST00000415208 CHIC1Q5VXU3 224 aa30.57■■■□□ 2.48
SSR1P2-201ENST00000415208 SENP3Q9H4L4 574 aaPredicted RBP27.12■■□□□ 1.93
SSR1P2-201ENST00000415208 PHF23Q9BUL5 403 aaPredicted RBP26.78■■□□□ 1.88
SSR1P2-201ENST00000415208 FOXD1Q16676 465 aa25.15■■□□□ 1.62
SSR1P2-201ENST00000415208 PLPPR3Q6T4P5 718 aa24.65■■□□□ 1.54
SSR1P2-201ENST00000415208 PPP6R1Q9UPN7 881 aa23.77■■□□□ 1.4
SSR1P2-201ENST00000415208 ADRA2BP18089 450 aa23.75■■□□□ 1.39
SSR1P2-201ENST00000415208 PIAS4Q8N2W9 510 aaPredicted RBP23.65■■□□□ 1.38
SSR1P2-201ENST00000415208 MSH5O43196 834 aa23.49■■□□□ 1.35
SSR1P2-201ENST00000415208 POTEDQ86YR6 584 aa22.19■■□□□ 1.14
SSR1P2-201ENST00000415208 SCAF1Q9H7N4 1312 aaKnown RBP21.88■■□□□ 1.09
SSR1P2-201ENST00000415208 MAPK8IP2Q13387 824 aaPredicted RBP21.67■■□□□ 1.06
SSR1P2-201ENST00000415208 PPP4R3CPQ6ZMV5 832 aa21.62■■□□□ 1.05
SSR1P2-201ENST00000415208 DMRT2Q9Y5R5 561 aa21.53■■□□□ 1.04
SSR1P2-201ENST00000415208 CNKSR2Q8WXI2 1034 aa21.16■□□□□ 0.98
SSR1P2-201ENST00000415208 NCBP3Q53F19 620 aaKnown RBP20.99■□□□□ 0.95
SSR1P2-201ENST00000415208 HOXD11P31277 338 aaPredicted RBP20.89■□□□□ 0.93
SSR1P2-201ENST00000415208 RNF216Q9NWF9 866 aaPredicted RBP20.86■□□□□ 0.93
SSR1P2-201ENST00000415208 DCAF8L1A6NGE4 600 aa20.67■□□□□ 0.9
SSR1P2-201ENST00000415208 NPM3O75607 178 aaKnown RBP20.57■□□□□ 0.88
SSR1P2-201ENST00000415208 KCNA4P22459 653 aa20.51■□□□□ 0.87
SSR1P2-201ENST00000415208 DNAJC5BQ9UF47 199 aa20.16■□□□□ 0.82
SSR1P2-201ENST00000415208 RNF39Q9H2S5 420 aa20.02■□□□□ 0.8
SSR1P2-201ENST00000415208 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.95■□□□□ 0.78
SSR1P2-201ENST00000415208 CACNB1Q02641 598 aaPredicted RBP19.91■□□□□ 0.78
SSR1P2-201ENST00000415208 C1QBPQ07021 282 aaKnown RBP19.81■□□□□ 0.76
SSR1P2-201ENST00000415208 SLC4A2P04920 1241 aa19.52■□□□□ 0.72
SSR1P2-201ENST00000415208 U3KPZ7 1027 aaPredicted RBP19.5■□□□□ 0.71
SSR1P2-201ENST00000415208 SLC4A1APQ9BWU0 796 aaKnown RBP19.49■□□□□ 0.71
SSR1P2-201ENST00000415208 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.22■□□□□ 0.67
SSR1P2-201ENST00000415208 HNRNPUL2Q1KMD3 747 aaKnown RBP19.22■□□□□ 0.67
SSR1P2-201ENST00000415208 APLP2Q06481 763 aa19.17■□□□□ 0.66
SSR1P2-201ENST00000415208 CAPN15O75808 1086 aa19.12■□□□□ 0.65
SSR1P2-201ENST00000415208 SAMD1Q6SPF0 538 aaPredicted RBP19.1■□□□□ 0.65
SSR1P2-201ENST00000415208 MYCNP04198 464 aaPredicted RBP19.09■□□□□ 0.65
SSR1P2-201ENST00000415208 SPINK5Q9NQ38 1064 aaPredicted RBP19.09■□□□□ 0.65
SSR1P2-201ENST00000415208 FOXD4L1Q9NU39 408 aa19.07■□□□□ 0.64
SSR1P2-201ENST00000415208 ZNF219Q9P2Y4 722 aaPredicted RBP18.92■□□□□ 0.62
SSR1P2-201ENST00000415208 TRHP20396 242 aaPredicted RBP18.89■□□□□ 0.61
SSR1P2-201ENST00000415208 DSG3P32926 999 aa18.87■□□□□ 0.61
SSR1P2-201ENST00000415208 ZBTB22O15209 634 aa18.8■□□□□ 0.6
SSR1P2-201ENST00000415208 ABCB7O75027 752 aa18.65■□□□□ 0.58
SSR1P2-201ENST00000415208 ATXN8OSP0DMR3 200 aa18.5■□□□□ 0.55
SSR1P2-201ENST00000415208 ATF5Q9Y2D1 282 aaPredicted RBP18.5■□□□□ 0.55
SSR1P2-201ENST00000415208 POLA2Q14181 598 aa18.47■□□□□ 0.55
SSR1P2-201ENST00000415208 CSRNP3Q8WYN3 585 aa18.33■□□□□ 0.52
SSR1P2-201ENST00000415208 EHMT2Q96KQ7 1210 aa18.32■□□□□ 0.52
SSR1P2-201ENST00000415208 ZBTB12Q9Y330 459 aaPredicted RBP18.21■□□□□ 0.51
SSR1P2-201ENST00000415208 RBM42Q9BTD8 480 aaKnown RBP18.09■□□□□ 0.49
SSR1P2-201ENST00000415208 FBLN2P98095 1184 aa17.91■□□□□ 0.46
SSR1P2-201ENST00000415208 OSCARQ8IYS5 282 aa17.82■□□□□ 0.44
SSR1P2-201ENST00000415208 AKT1S1Q96B36 256 aa17.72■□□□□ 0.43
SSR1P2-201ENST00000415208 MKRN4PQ13434 485 aaPredicted RBP17.68■□□□□ 0.42
SSR1P2-201ENST00000415208 SPDYE2BA6NHP3 402 aa17.63■□□□□ 0.41
SSR1P2-201ENST00000415208 SPDYE6P0CI01 402 aa17.63■□□□□ 0.41
SSR1P2-201ENST00000415208 SPDYE2Q495Y8 402 aa17.63■□□□□ 0.41
SSR1P2-201ENST00000415208 REM2Q8IYK8 340 aaPredicted RBP17.51■□□□□ 0.39
SSR1P2-201ENST00000415208 POTEHQ6S545 545 aa17.5■□□□□ 0.39
SSR1P2-201ENST00000415208 CHRDL2Q6WN34 429 aa17.48■□□□□ 0.39
SSR1P2-201ENST00000415208 ZNF692Q9BU19 519 aaPredicted RBP17.48■□□□□ 0.39
SSR1P2-201ENST00000415208 SSUH2Q9Y2M2 353 aa17.38■□□□□ 0.37
SSR1P2-201ENST00000415208 PITPNM1O00562 1244 aa17.3■□□□□ 0.36
SSR1P2-201ENST00000415208 SPDYE1Q8NFV5 336 aaPredicted RBP17.24■□□□□ 0.35
SSR1P2-201ENST00000415208 PABPN1Q86U42 306 aaKnown RBP eCLIP17.2■□□□□ 0.34
SSR1P2-201ENST00000415208 CLEC11AQ9Y240 323 aa17.17■□□□□ 0.34
SSR1P2-201ENST00000415208 SPDYE4A6NLX3 237 aa17.13■□□□□ 0.33
SSR1P2-201ENST00000415208 PIP4P2Q8N4L2 257 aa17.12■□□□□ 0.33
SSR1P2-201ENST00000415208 FXR2P51116 673 aaKnown RBP eCLIP17.09■□□□□ 0.33
SSR1P2-201ENST00000415208 PRR29P0C7W0 189 aa16.96■□□□□ 0.31
SSR1P2-201ENST00000415208 STAG3Q9UJ98 1225 aa16.9■□□□□ 0.3
SSR1P2-201ENST00000415208 PRKAR2AP13861 404 aaKnown RBP16.89■□□□□ 0.29
SSR1P2-201ENST00000415208 HAX1O00165 279 aa16.76■□□□□ 0.27
SSR1P2-201ENST00000415208 CHADLQ6NUI6 762 aa16.74■□□□□ 0.27
SSR1P2-201ENST00000415208 PROM2Q8N271 834 aa16.72■□□□□ 0.27
SSR1P2-201ENST00000415208 FKBP8Q14318 412 aa16.64■□□□□ 0.25
SSR1P2-201ENST00000415208 SP7Q8TDD2 431 aaPredicted RBP16.59■□□□□ 0.25
SSR1P2-201ENST00000415208 FARP1Q9Y4F1 1045 aaPredicted RBP16.58■□□□□ 0.24
SSR1P2-201ENST00000415208 CREBZFQ9NS37 354 aa16.55■□□□□ 0.24
SSR1P2-201ENST00000415208 C19orf67A6NJJ6 358 aa16.52■□□□□ 0.24
SSR1P2-201ENST00000415208 EVX2Q03828 476 aa16.46■□□□□ 0.23
SSR1P2-201ENST00000415208 CD44P16070 742 aaKnown RBP16.39■□□□□ 0.21
SSR1P2-201ENST00000415208 PLEKHG5O94827 1062 aa16.38■□□□□ 0.21
SSR1P2-201ENST00000415208 NPM1P06748 294 aaKnown RBP eCLIP16.38■□□□□ 0.21
SSR1P2-201ENST00000415208 MIER1Q8N108 512 aa16.33■□□□□ 0.2
SSR1P2-201ENST00000415208 MNX1P50219 401 aaPredicted RBP16.3■□□□□ 0.2
SSR1P2-201ENST00000415208 FBXO3Q9UK99 471 aa16.29■□□□□ 0.2
SSR1P2-201ENST00000415208 PLCD3Q8N3E9 789 aa16.26■□□□□ 0.19
SSR1P2-201ENST00000415208 PAK3O75914 559 aaPredicted RBP16.25■□□□□ 0.19
SSR1P2-201ENST00000415208 ZRANB1Q9UGI0 708 aa16.22■□□□□ 0.19
SSR1P2-201ENST00000415208 CLCN6P51797 869 aa16.2■□□□□ 0.18
SSR1P2-201ENST00000415208 GABBR2O75899 941 aa16.19■□□□□ 0.18
SSR1P2-201ENST00000415208 ZBTB47Q9UFB7 747 aaPredicted RBP16.17■□□□□ 0.18
SSR1P2-201ENST00000415208 ZNF579Q8NAF0 562 aaKnown RBP16.15■□□□□ 0.18
SSR1P2-201ENST00000415208 TSPYL2Q9H2G4 693 aaPredicted RBP16.02■□□□□ 0.16
SSR1P2-201ENST00000415208 VASPP50552 380 aaPredicted RBP16■□□□□ 0.15
SSR1P2-201ENST00000415208 PHF12Q96QT6 1004 aa15.97■□□□□ 0.15
SSR1P2-201ENST00000415208 RASEFQ8IZ41 740 aa15.94■□□□□ 0.14
SSR1P2-201ENST00000415208 DCBLD2Q96PD2 775 aa15.9■□□□□ 0.14
SSR1P2-201ENST00000415208 CCDC61Q9Y6R9 512 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms