Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC140113.3-201ENST00000605663 199 ntBASIC21.75■■□□□ 1.07
CCDC144BQ3MJ40 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC144BQ3MJ40 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC144BQ3MJ40 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144BQ3MJ40 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC144BQ3MJ40 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144BQ3MJ40 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144BQ3MJ40 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144BQ3MJ40 AC009113.1-201ENST00000570267 2443 ntBASIC21.75■■□□□ 1.07
CCDC144BQ3MJ40 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC144BQ3MJ40 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC144BQ3MJ40 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC144BQ3MJ40 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC144BQ3MJ40 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC144BQ3MJ40 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC144BQ3MJ40 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC144BQ3MJ40 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC144BQ3MJ40 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
CCDC144BQ3MJ40 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC144BQ3MJ40 HOMER2P1-201ENST00000455653 964 ntBASIC21.74■■□□□ 1.07
CCDC144BQ3MJ40 AL359075.1-203ENST00000462729 1002 ntBASIC21.74■■□□□ 1.07
CCDC144BQ3MJ40 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC144BQ3MJ40 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC144BQ3MJ40 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
CCDC144BQ3MJ40 AL121956.5-201ENST00000625261 221 ntBASIC21.74■■□□□ 1.07
CCDC144BQ3MJ40 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
CCDC144BQ3MJ40 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC144BQ3MJ40 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC144BQ3MJ40 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC144BQ3MJ40 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC144BQ3MJ40 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC144BQ3MJ40 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
CCDC144BQ3MJ40 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 PCED1CP-201ENST00000419887 785 ntBASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC144BQ3MJ40 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 AC009947.2-201ENST00000444014 672 ntBASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 KRT8P45-201ENST00000414328 1447 ntBASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC144BQ3MJ40 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CCDC144BQ3MJ40 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CCDC144BQ3MJ40 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC144BQ3MJ40 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC144BQ3MJ40 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CCDC144BQ3MJ40 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms